Miyakogusa Predicted Gene

Lj0g3v0024799.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0024799.1 Non Chatacterized Hit- tr|H9VE67|H9VE67_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,57.69,2e-17,RNI-like,NULL; no
description,NULL,NODE_35593_length_1006_cov_204.871765.path1.1
         (877 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW631619 similar to UniRef100_Q208P4 Cluster: RAMOSUS4;...   823   0.0  
gnl|LJGI|FS353126 homologue to UniRef100_Q208P4 Cluster: RAMOSUS...   446   e-124

>gnl|LJGI|BW631619 similar to UniRef100_Q208P4 Cluster: RAMOSUS4; n=1; Pisum
           sativum|Rep: RAMOSUS4 - Pisum sativum (Garden pea),
           partial (19%)
          Length = 460

 Score =  823 bits (415), Expect = 0.0
 Identities = 418/419 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggttttgagtaagaagtgtcccaatttgagggttctcaggttgggtcagtttcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42  atggaggttttgagtaagaagtgtcccaatttgagggttctcaggttgggtcagtttcag 101

                                                                       
Query: 61  gggatttgcttggccattgggtcaaagctcgatggaattgccctttgccaagggcttcga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gggatttgcttggccattgggtcaaagctcgatggaattgccctttgccaagggcttcga 161

                                                                       
Query: 121 tccttgtccattcatggctgtgcggacctcgatgacatggggttgattgagattgcaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tccttgtccattcatggctgtgcggacctcgatgacatggggttgattgagattgcaaga 221

                                                                       
Query: 181 ggttgttccaggttggttcagtttgagcttcagggctgcaagcttgtcacggagaaaggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggttgttccaggttggttcagtttgagcttcagggctgcaagcttgtcacggagaaaggg 281

                                                                       
Query: 241 ttggggaccatggcttgcttgcttcgtaagactcttgtggatgtcaaggtttcttgctgt 300
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 282 ttggggaccatggcttgcttgcttcgtaagactcctgtggatgtcaaggtttcttgctgt 341

                                                                       
Query: 301 gtcaatctcgacaccgcggcggcactcagagctctggaccctatccgggaccggattgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtcaatctcgacaccgcggcggcactcagagctctggaccctatccgggaccggattgag 401

                                                                      
Query: 361 cggcttcatgtggattgcgtgtggaatggcttgaaggacagtgatgacaacatgggagg 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cggcttcatgtggattgcgtgtggaatggcttgaaggacagtgatgacaacatgggagg 460


>gnl|LJGI|FS353126 homologue to UniRef100_Q208P4 Cluster: RAMOSUS4; n=1; Pisum
           sativum|Rep: RAMOSUS4 - Pisum sativum (Garden pea),
           partial (25%)
          Length = 749

 Score =  446 bits (225), Expect = e-124
 Identities = 225/225 (100%)
 Strand = Plus / Minus

                                                                       
Query: 653 taccggtggcagggttggaggattgccctaacctggaagagattcgtgtgaaggttgaag 712
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 taccggtggcagggttggaggattgccctaacctggaagagattcgtgtgaaggttgaag 690

                                                                       
Query: 713 gagattgcagggggcagccaaaaccagctgagagtgaatttggtctcagcatcctggctt 772
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gagattgcagggggcagccaaaaccagctgagagtgaatttggtctcagcatcctggctt 630

                                                                       
Query: 773 gttatccacagctatcaaagatgcagctggattgtggtgatacaagaggctatgtgctca 832
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gttatccacagctatcaaagatgcagctggattgtggtgatacaagaggctatgtgctca 570

                                                        
Query: 833 cagcgccttcagggcagatggatctgagcttgtgggagaggtttt 877
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cagcgccttcagggcagatggatctgagcttgtgggagaggtttt 525