Miyakogusa Predicted Gene
- Lj0g3v0024609.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0024609.2 tr|I1MML0|I1MML0_SOYBN Cytosine-specific
methyltransferase OS=Glycine max GN=Gma.26329 PE=3
SV=1,73,0,CHROMO_2,Chromo domain/shadow; BAH,Bromo adjacent homology
(BAH) domain; SAM_MT_C5_2,DNA (cytosine-5,CUFF.1384.2
(2817 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68930 similar to UniRef100_Q94F87 Cluster: DNA (cytos... 969 0.0
gnl|LJGI|TC76475 weakly similar to UniRef100_Q94F87 Cluster: DNA... 377 e-103
gnl|LJGI|BP042340 UniRef100_Q2J8A3 Cluster: Aminomethyltransfera... 347 2e-94
>gnl|LJGI|TC68930 similar to UniRef100_Q94F87 Cluster: DNA
(cytosine-5)-methyltransferase CMT2; n=1; Arabidopsis
thaliana|Rep: DNA (cytosine-5)-methyltransferase CMT2 -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 742
Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 2329 cgacatccaacagagaatcctgtgctaccatctggaaagccattggtcccagattacgcc 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgacatccaacagagaatcctgtgctaccatctggaaagccattggtcccagattacgcc 60
Query: 2389 ttaacatttgagcaggggaagtctaagaggccatttgcacggctgtggtgggatgaaaca 2448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaacatttgagcaggggaagtctaagaggccatttgcacggctgtggtgggatgaaaca 120
Query: 2449 gttcctactgcattaaccaccccaagttgtcatcaccaggcaatactacatccagtgcag 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcctactgcattaaccaccccaagttgtcatcaccaggcaatactacatccagtgcag 180
Query: 2509 gatcgtgtcctcactgtacgagaatttgcaaggctgcaagggtttcctgattactataga 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatcgtgtcctcactgtacgagaatttgcaaggctgcaagggtttcctgattactataga 240
Query: 2569 tttagtgggacagtgaaagagaggtactgtcaaattggaaatgcagttgctgtttctgtt 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttagtgggacagtgaaagagaggtactgtcaaattggaaatgcagttgctgtttctgtt 300
Query: 2629 tcccgggctttaggtcattccctaggaattgcatatagaaagctcagtggaaatgagcca 2688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcccgggctttaggtcattccctaggaattgcatatagaaagctcagtggaaatgagcca 360
Query: 2689 ctaatgaccctcccgcccaagttctctctctctaattatcatcagttatcaaatgatcat 2748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctaatgaccctcccgcccaagttctctctctctaattatcatcagttatcaaatgatcat 420
Query: 2749 cttggccagaatttggatcctctggagcaagagaccggagggaatctgaattcgaatgga 2808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttggccagaatttggatcctctggagcaagagaccggagggaatctgaattcgaatgga 480
Query: 2809 gctgactag 2817
|||||||||
Sbjct: 481 gctgactag 489
>gnl|LJGI|TC76475 weakly similar to UniRef100_Q94F87 Cluster: DNA
(cytosine-5)-methyltransferase CMT2; n=1; Arabidopsis
thaliana|Rep: DNA (cytosine-5)-methyltransferase CMT2 -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 549
Score = 377 bits (190), Expect = e-103
Identities = 196/198 (98%)
Strand = Plus / Plus
Query: 2620 gtttctgtttcccgggctttaggtcattccctaggaattgcatatagaaagctcagtgga 2679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttctgtttcccgggctttaggtcattccctaggaattgcatatagaaagctcagtgga 60
Query: 2680 aatgagccactaatgaccctcccgcccaagttctctctctctaattatcatcagttatca 2739
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 aatgagcccctaatgaccctcccgccccagttctctctctctaattatcatcagttatca 120
Query: 2740 aatgatcatcttggccagaatttggatcctctggagcaagagaccggagggaatctgaat 2799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgatcatcttggccagaatttggatcctctggagcaagagaccggagggaatctgaat 180
Query: 2800 tcgaatggagctgactag 2817
||||||||||||||||||
Sbjct: 181 tcgaatggagctgactag 198
>gnl|LJGI|BP042340 UniRef100_Q2J8A3 Cluster: Aminomethyltransferase; n=1; Frankia sp.
CcI3|Rep: Aminomethyltransferase - Frankia sp., partial
(3%)
Length = 453
Score = 347 bits (175), Expect = 2e-94
Identities = 207/217 (95%), Gaps = 3/217 (1%)
Strand = Plus / Plus
Query: 1 atgatgagatctccaaaaaccaaatccaaatctgaaatcagcttagccctcactgtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgatgagatctccaaaaaccaaatccaaatctgaaatcagcttagccctcactgtgagg 186
Query: 61 acgcatgcagcggagctccggcggtctccgaggatgaattctgctccggccgccgccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 acgcatgcagcggagctccggcggtctccgaggatgaattctgctccggccgccgccaat 246
Query: 121 gtgaggaaaaggaaggggaaggtggcagagatgaaaat---gtcggagggtaagccctcc 177
|||||||||||||||||||||||||| ||||| | ||| ||||||||||||||| |||
Sbjct: 247 gtgaggaaaaggaaggggaaggtggcggagattacaatgtcgtcggagggtaagccttcc 306
Query: 178 agattcgcaacagcttctcgtggtattgttgtccagc 214
||||||||| |||||||||||| ||||||||| ||||
Sbjct: 307 agattcgcagcagcttctcgtgctattgttgttcagc 343
Score = 75.8 bits (38), Expect = 1e-12
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 63 gcatgcagcggagctccggcggtctccgaggatgaattctgctccggccgccgccaat 120
|||||||| |||||||||||||||||||||| |||||||||||| || || |||||||
Sbjct: 396 gcatgcagaggagctccggcggtctccgaggctgaattctgctctggtcgacgccaat 453