Miyakogusa Predicted Gene
- Lj0g3v0024529.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0024529.1 tr|B9MUB0|B9MUB0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_917368 PE=4
SV=1,70.49,0,seg,NULL; PRLI-INTERACTING FACTOR L,NULL;
COBW-RELATED,NULL; Cobalamin synthesis protein cobW C-term,CUFF.1380.1
(1275 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82430 similar to UniRef100_A7QHF4 Cluster: Chromosome... 1532 0.0
gnl|LJGI|TC72814 similar to UniRef100_Q9LMR1 Cluster: F7H2.7 pro... 52 9e-06
>gnl|LJGI|TC82430 similar to UniRef100_A7QHF4 Cluster: Chromosome chr2 scaffold_97,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_97, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 974
Score = 1532 bits (773), Expect = 0.0
Identities = 793/802 (98%)
Strand = Plus / Plus
Query: 470 aaatgctactggagctggctagnnnnnnncgagacgttattgatcatattgttattgaaa 529
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 aaatgctactggagctggctagaaaaaaacgagacgttattgatcatattgttattgaaa 60
Query: 530 ccacaggtctggcaaagccaggccctgttattgaaacattttgcagtgatgaactggttt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccacaggtctggcaaagccaggccctgttattgaaacattttgcagtgatgaactggttt 120
Query: 590 ctcagtatgtgaaacttgatggagttgtaactttggttgactgcaagcatgccatgcaac 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcagtatgtgaaacttgatggagttgtaactttggttgactgcaagcatgccatgcaac 180
Query: 650 atttaaatgaagtaaaaccaagatttgtggttaatgaggcagtagaacaagttgcatatg 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttaaatgaagtaaaaccaagatttgtggttaatgaggcagtagaacaagttgcatatg 240
Query: 710 ctgaccgaatcattttgaacaagatagatttggtttctgaatctgagttaaatgcactaa 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgaccgaatcattttgaacaagatagatttggtttctgaatctgagttaaatgcactaa 300
Query: 770 ctaagaaaattaagcacatcaatggaatggcacaaattaagcaagctaaatttggatctg 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaagaaaattaagcacatcaatggaatggcacaaattaagcaagctaaatttggatctg 360
Query: 830 ttgacatagactttgttctgggggtaggaggatatgatcttcagagaattgaatctgatg 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgacatagactttgttctgggggtaggaggatatgatcttcagagaattgaatctgatg 420
Query: 890 tccatggagagtgtccctcgtcggctagccatcaagatgattccggacatgaacacacag 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccatggagagtgtccctcgtcggctagccatcaagatgattccggacatgaacacacag 480
Query: 950 ggcatcaccatcacgatcatgtacatgattctgctgtctccagtgtcagtattgttgcag 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcatcaccatcacgatcatgtacatgattctgctgtctccagtgtcagtattgttgcag 540
Query: 1010 agggaaccctagatcttgatgaggttgacgattggcttgagaggttggttgaagaaaaag 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agggaaccctagatcttgatgaggttgacgattggcttgagaggttggttgaagaaaaag 600
Query: 1070 gagaggacctatacagaatgaagggtgtcttgtcagtggatggttctgatcaacgatatg 1129
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 601 gagaggacctatacagaatgaagggtgttttgtcagtggatggttttgatcaacgatatg 660
Query: 1130 tgcttcagggggtgcattccatattagatggcagcaaaggaaaagaatgggaacctgaag 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcttcagggggtgcattccatattagatggcagcaaaggaaaagaatgggaacctgaag 720
Query: 1190 aaaagaggataaacaaacttgtgttcattggaaggaatttggatgaaaccacccttagaa 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaaagaggataaacaaacttgtgttcattggaaggaatttggatgaaaccacccttagaa 780
Query: 1250 aaggtttcagaggttgtttagt 1271
||||||||||||||||||||||
Sbjct: 781 aaggtttcagaggttgtttagt 802
>gnl|LJGI|TC72814 similar to UniRef100_Q9LMR1 Cluster: F7H2.7 protein; n=1;
Arabidopsis thaliana|Rep: F7H2.7 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (35%)
Length = 688
Score = 52.0 bits (26), Expect = 9e-06
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 233 cccccgataatcgcgttccagctaccgttataactggttttcttggctccggaaagacta 292
|||||||||||||| | || |||||| | || || || ||||| |||||||| ||||| |
Sbjct: 273 cccccgataatcgcatccctgctaccatcatcaccggctttctcggctccggcaagacaa 332
Query: 293 ctcttctgaatcacattctcacatcccaacatggcaagcggatagctgtgatcgaaaacg 352
| || ||||| || |||||||| || | ||||| ||||| || || || ||||| || |
Sbjct: 333 cgctgctgaaccatattctcactgccgagcatggaaagcgaattgcggtcatcgagaatg 392
Query: 353 agtttggtga 362
||||||||||
Sbjct: 393 agtttggtga 402