Miyakogusa Predicted Gene
- Lj0g3v0024489.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0024489.1 tr|G7IG61|G7IG61_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_053s1015 PE=4
SV=1,29.07,1e-18,F-box,F-box domain, cyclin-like; FBD,FBD; no
description,NULL; FAMILY NOT NAMED,NULL; A Receptor
for,gene.g2147.t1.1
(1107 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosom... 70 3e-11
gnl|LJGI|FS329231 similar to UniRef100_A2Q1U7 Cluster: Cyclin-li... 66 5e-10
gnl|LJGI|TC63810 weakly similar to UniRef100_A7QK65 Cluster: Chr... 66 5e-10
gnl|LJGI|TC64245 weakly similar to UniRef100_A7QK60 Cluster: Chr... 64 2e-09
gnl|LJGI|TC69553 weakly similar to UniRef100_Q8L7H1 Cluster: F-b... 62 8e-09
gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyc... 62 8e-09
gnl|LJGI|FS343807 60 3e-08
gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-b... 60 3e-08
gnl|LJGI|TC59854 similar to UniRef100_A7QK60 Cluster: Chromosome... 60 3e-08
gnl|LJGI|TC73575 similar to UniRef100_A7QK65 Cluster: Chromosome... 58 1e-07
gnl|LJGI|TC72625 similar to UniRef100_A7QK60 Cluster: Chromosome... 52 8e-06
>gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 812
Score = 69.9 bits (35), Expect = 3e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 10 aggattagcgtgttgccaagtgaagttctctgtcacattctctcgtttcttccaactga 68
||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||||
Sbjct: 9 aggattagcaagttgccagatgaagttctctgtcacattctctcatttcttcccactga 67
Score = 52.0 bits (26), Expect = 8e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 295 tggttaaacgcagcaatgcagcaacgccaagttcagaa 332
||||||||||| ||||| || |||||||||||||||||
Sbjct: 321 tggttaaacgccgcaatacaacaacgccaagttcagaa 358
>gnl|LJGI|FS329231 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 767
Score = 65.9 bits (33), Expect = 5e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 6 tgacaggattagcgtgttgccaagtgaagttctctgtcacattctctcgtttcttccaac 65
||||||||||||| |||||||| |||| | || |||||||||||||| |||||||||||
Sbjct: 311 tgacaggattagcatgttgccagatgaactcctttgtcacattctctcctttcttccaac 370
Query: 66 t 66
|
Sbjct: 371 t 371
>gnl|LJGI|TC63810 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 750
Score = 65.9 bits (33), Expect = 5e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 6 tgacaggattagcgtgttgccaagtgaagttctctgtcacattctctcgtttcttccaac 65
||||||||||||| |||||||| |||||| || | |||||||||||| |||||||||||
Sbjct: 256 tgacaggattagcatgttgccagatgaagtactttatcacattctctcttttcttccaac 315
Query: 66 t 66
|
Sbjct: 316 t 316
>gnl|LJGI|TC64245 weakly similar to UniRef100_A7QK60 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 777
Score = 63.9 bits (32), Expect = 2e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 7 gacaggattagcgtgttgccaagtgaagttctctgtcacattctctcgtttcttccaact 66
|||||||||||| ||||||||| |||||| || | |||||||||||| ||||| ||||||
Sbjct: 505 gacaggattagcatgttgccaaatgaagtactttatcacattctctcttttctcccaact 564
>gnl|LJGI|TC69553 weakly similar to UniRef100_Q8L7H1 Cluster: F-box/LRR-repeat protein
At4g14103; n=1; Arabidopsis thaliana|Rep:
F-box/LRR-repeat protein At4g14103 - Arabidopsis thaliana
(Mouse-ear cress), partial (13%)
Length = 1557
Score = 61.9 bits (31), Expect = 8e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 799 tggaatttgttgcttgatatgctcaatcattgccctcaacttcaaac 845
||||||||| |||||||||||||||||||||| ||| | ||||||||
Sbjct: 1024 tggaatttggtgcttgatatgctcaatcattgtcctaagcttcaaac 1070
>gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD;
Zinc finger, FYVE/PHD-type; n=1; Medicago truncatula|Rep:
Cyclin-like F-box; FBD; Zinc finger, FYVE/PHD-type -
Medicago truncatula (Barrel medic), partial (19%)
Length = 1534
Score = 61.9 bits (31), Expect = 8e-09
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 741 catttctgtgtttccaaattcaatgcatttggagctcaagttgggaggctctattgactg 800
|||| |||||||||| |||| ||| ||| ||||||||| || ||||||||||| | |
Sbjct: 986 cattcctgtgtttcccaatttaattcatatggagctcagctttggaggctctataaatgg 1045
Query: 801 gaatttgttgcttgatatgctcaatcattgccctcaacttcaaacttttgt 851
|| | || |||||||||||||||||| |||||| | ||||| ||||||||
Sbjct: 1046 gagtgtggcgcttgatatgctcaatcactgccctaagcttcagacttttgt 1096
>gnl|LJGI|FS343807
Length = 619
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 810 gcttgatatgctcaatcattgccctcaacttcaaacttttgt 851
||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 120 gcttgatatgctcaatcattgccctaagcttcaaactgttgt 161
>gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-box/FBD/LRR-repeat
protein At4g00160; n=2; Arabidopsis thaliana|Rep:
F-box/FBD/LRR-repeat protein At4g00160 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 773
Score = 60.0 bits (30), Expect = 3e-08
Identities = 93/114 (81%)
Strand = Plus / Plus
Query: 21 gttgccaagtgaagttctctgtcacattctctcgtttcttccaactgaggatgttgttgc 80
||||||| ||||||||| ||||| |||||||| |||||||| || || |||| ||||||
Sbjct: 64 gttgccagatgaagttctgtgtcaaattctctcatttcttcccacggaagatgctgttgc 123
Query: 81 aactactgttatttctaagaggtggagatcattatggcttttagtcccaaccct 134
|| | |||| | | ||||||||||| || | ||||||| ||||||||||||
Sbjct: 124 cacaagtgttctctgcaagaggtggagttccctctggctttcagtcccaaccct 177
>gnl|LJGI|TC59854 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 848
Score = 60.0 bits (30), Expect = 3e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 389 gcattttcagctctacaactcttgttgttcttaagttg 426
|||||||||||| || ||||||||||||||||||||||
Sbjct: 558 gcattttcagctgtagaactcttgttgttcttaagttg 595
>gnl|LJGI|TC73575 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 1447
Score = 58.0 bits (29), Expect = 1e-07
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 30 tgaagttctctgtcacattctctcgtttcttccaactgaggatgttgttgcaactactgt 89
||||||||| ||||| ||||| || |||||||| ||||| || | |||||| || | |||
Sbjct: 84 tgaagttctgtgtcaaattctttcatttcttcccactgaagaagctgttgccaccagtgt 143
Query: 90 tatttctaagaggtggagatcattatggcttttagtcccaaccct 134
| | || |||||||||| ||| | ||||||| ||||||||||||
Sbjct: 144 tctctcacagaggtggagttcactctggctttcagtcccaaccct 188
>gnl|LJGI|TC72625 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 1949
Score = 52.0 bits (26), Expect = 8e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 459 tgttgaccttccctcactcaaagccctacatttg 492
|||||| ||||||||||||||| |||||||||||
Sbjct: 1615 tgttgagcttccctcactcaaatccctacatttg 1648