Miyakogusa Predicted Gene
- Lj0g3v0024429.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0024429.2 tr|D7LAT4|D7LAT4_ARALL Zinc finger family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_,60.49,9e-19,
,CUFF.1376.2
(255 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79540 similar to UniRef100_A7Q7I1 Cluster: Chromosome... 307 2e-83
gnl|LJGI|BP077953 similar to UniRef100_A7Q7I1 Cluster: Chromosom... 272 1e-72
gnl|LJGI|TC78254 weakly similar to UniRef100_A7Q7I1 Cluster: Chr... 236 5e-62
gnl|LJGI|TC62019 similar to UniRef100_A7Q7I1 Cluster: Chromosome... 232 8e-61
gnl|LJGI|CB827025 similar to UniRef100_A7Q7I1 Cluster: Chromosom... 60 7e-09
>gnl|LJGI|TC79540 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (37%)
Length = 701
Score = 307 bits (155), Expect = 2e-83
Identities = 194/207 (93%)
Strand = Plus / Plus
Query: 1 atggatgagcatggtaataattcacaggatgctagggaggatgttgatctagatggactt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 260 atggatgagcatgttaataattcacaggatgctagggaggatgttgatctagacgaactt 319
Query: 61 tcatatgaggagctactagctttggtggaaattgtaggaattgaaagcagaggacttcca 120
||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||||||
Sbjct: 320 tcatatgagcagctactagcattgggggaagttgtaggaattgaaagcattggacttcca 379
Query: 121 actgatactattgcatatttgccttcagtcaagtacaagactgggagtgatcaacatgga 180
|||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 actgatacaatagcatattttccttcagtcaagtacaagaccgggagtgatcaacatgga 439
Query: 181 agcaatgattcgtgtgttatttgtcgg 207
|||||||||||||||||||||||||||
Sbjct: 440 agcaatgattcgtgtgttatttgtcgg 466
>gnl|LJGI|BP077953 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 377
Score = 272 bits (137), Expect = 1e-72
Identities = 188/205 (91%)
Strand = Plus / Minus
Query: 46 gatctagatggactttcatatgaggagctactagctttggtggaaattgtaggaattgaa 105
|||||||| | |||||| ||||||||||||||||| |||| |||| | ||||||||||||
Sbjct: 377 gatctagacgaactttcgtatgaggagctactagcattgggggaagtggtaggaattgaa 318
Query: 106 agcagaggacttccaactgatactattgcatatttgccttcagtcaagtacaagactggg 165
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |
Sbjct: 317 agcagaggacttccaattgatactattgcatacttgccttcagtcaagtacaagaccgag 258
Query: 166 agtgatcaacatggaagcaatgattcgtgtgttatttgtcggctggactatgaggacgtg 225
| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct: 257 aatgatcaacatggaagcaacgattcgtgtgttatttgtcggttggactatgaggatgca 198
Query: 226 ctgagatatctgcttctgggagcaa 250
|||||||||||||||||||||||||
Sbjct: 197 ctgagatatctgcttctgggagcaa 173
>gnl|LJGI|TC78254 weakly similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 465
Score = 236 bits (119), Expect = 5e-62
Identities = 179/199 (89%)
Strand = Plus / Plus
Query: 4 gatgagcatggtaataattcacaggatgctagggaggatgttgatctagatggactttca 63
|||||||||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||
Sbjct: 19 gatgagcatggtaataattcacaggatgcttggggggatgttgatccagacgaactttca 78
Query: 64 tatgaggagctactagctttggtggaaattgtaggaattgaaagcagaggacttccaact 123
||||||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 79 tatgaggagctactagcattgtgggaagtggtaggaattgaaagcagaggacttccaact 138
Query: 124 gatactattgcatatttgccttcagtcaagtacaagactgggagtgatcaacatggaagc 183
|||||||| ||||||||||||||||||| ||| |||| |||| ||||||||| ||||||
Sbjct: 139 aatactattacatatttgccttcagtcaactaccagaccgggaatgatcaacacggaagc 198
Query: 184 aatgattcgtgtgttattt 202
||||||| ||| ||||||
Sbjct: 199 catgattcatgtattattt 217
>gnl|LJGI|TC62019 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (73%)
Length = 1388
Score = 232 bits (117), Expect = 8e-61
Identities = 195/221 (88%)
Strand = Plus / Plus
Query: 1 atggatgagcatggtaataattcacaggatgctagggaggatgttgatctagatggactt 60
||||| ||||||||| |||||||||||||||| ||||||||||||||| ||| | ||||
Sbjct: 755 atggaggagcatggtggtaattcacaggatgcttgggaggatgttgatccagacgaactt 814
Query: 61 tcatatgaggagctactagctttggtggaaattgtaggaattgaaagcagaggacttcca 120
|| || ||||| |||||||| |||| ||| | || |||| |||||||||||| ||| ||
Sbjct: 815 tcctacgaggaactactagcattgggtgaagtagttggaactgaaagcagaggtcttaca 874
Query: 121 actgatactattgcatatttgccttcagtcaagtacaagactgggagtgatcaacatgga 180
|| ||||||||||| | |||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 875 acagatactattgcctctttgccttcaatcaagtacaagactgggaatgatcaacatgga 934
Query: 181 agcaatgattcgtgtgttatttgtcggctggactatgagga 221
||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 935 agccatgattcgtgtgttatttgtcgggtggactatgagga 975
>gnl|LJGI|CB827025 similar to UniRef100_A7Q7I1 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 536
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 atggatgagcatggtaataattcacaggatgctagggaggatgttg 46
||||| ||||||||| |||||||||||||||| ||||||||||||
Sbjct: 491 atggaggagcatggtggtaattcacaggatgcttgggaggatgttg 536