Miyakogusa Predicted Gene

Lj0g3v0023009.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0023009.1 Non Chatacterized Hit- tr|I1JHU4|I1JHU4_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,89.39,0,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
Serine/Threonine protein kinases, catalytic,Ser,2893_g.1
         (595 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI420282 similar to UniRef100_A7PYY9 Cluster: Chromosom...   127   8e-29
gnl|LJGI|TC78935 homologue to UniRef100_Q8LKR3 Cluster: Receptor...    60   2e-08

>gnl|LJGI|BI420282 similar to UniRef100_A7PYY9 Cluster: Chromosome chr4 scaffold_39,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_39, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 468

 Score =  127 bits (64), Expect = 8e-29
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                       
Query: 532 ggaaaagcttcttttgaaactagacttgcaggaacttttggttatttggcaccggaatat 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggaaaagcttcttttgaaactagacttgcaggaacttttggttatttggcaccggaatat 60

               
Query: 592 gcag 595
           ||||
Sbjct: 61  gcag 64


>gnl|LJGI|TC78935 homologue to UniRef100_Q8LKR3 Cluster: Receptor-like kinase RHG4;
           n=1; Glycine max|Rep: Receptor-like kinase RHG4 -
           Glycine max (Soybean), partial (25%)
          Length = 736

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 388 gatgtggcaaggggtgttgagtacctccatggcttagcccatcaaagctttatacacaga 447
           ||||| |||||||| || || ||| | || |||||||| || || ||||| || ||||| 
Sbjct: 84  gatgttgcaaggggagtggaatacttgcacggcttagctcagcagagcttcattcacagg 143

                                                                       
Query: 448 gacttaaaaccgtcaaacattctccttggagatgatatgagagcaaaggttgcggatttt 507
           ||||| || || |||||||| ||  | || ||||| ||||||||||||||||| ||||||
Sbjct: 144 gacttgaagccctcaaacatcctattgggtgatgacatgagagcaaaggttgcagatttt 203

             
Query: 508 gg 509
           ||
Sbjct: 204 gg 205