Miyakogusa Predicted Gene

Lj0g3v0022809.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0022809.1 Non Chatacterized Hit- tr|K4AJV4|K4AJV4_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,38.56,8e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.1287.1
         (483 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV409746 weakly similar to UniRef100_A7Q816 Cluster: Ch...   533   e-151

>gnl|LJGI|AV409746 weakly similar to UniRef100_A7Q816 Cluster: Chromosome undetermined
           scaffold_62, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (17%)
          Length = 398

 Score =  533 bits (269), Expect = e-151
 Identities = 269/269 (100%)
 Strand = Plus / Plus

                                                                       
Query: 202 aattgcattccaatttccgcaatcgccgacgcggccgcgaactccggtgaggacgaagaa 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aattgcattccaatttccgcaatcgccgacgcggccgcgaactccggtgaggacgaagaa 189

                                                                       
Query: 262 gcccccctcccaccggaattcctcgccgccacgtcagctcaaaagctcccactcggcccc 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gcccccctcccaccggaattcctcgccgccacgtcagctcaaaagctcccactcggcccc 249

                                                                       
Query: 322 aaccggaacttcgactccgacaccgtccacgcccccgccggtgccgcctgcaccctcttc 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaccggaacttcgactccgacaccgtccacgcccccgccggtgccgcctgcaccctcttc 309

                                                                       
Query: 382 ccggacgacctccgccgcttcatgacataccccatcaacggctcctgcccagacgacgag 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ccggacgacctccgccgcttcatgacataccccatcaacggctcctgcccagacgacgag 369

                                        
Query: 442 cttctctcccagaagcttctcctgaaagg 470
           |||||||||||||||||||||||||||||
Sbjct: 370 cttctctcccagaagcttctcctgaaagg 398



 Score =  109 bits (55), Expect = 2e-23
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 73  ataaacatgggttcccatagtagcaacaaccataattcaaaacctctaactacca 127
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ataaacatgggttcccatagtagcaacaaccataattcaaaacctctaactacca 55