Miyakogusa Predicted Gene
- Lj0g3v0022139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0022139.1 Non Chatacterized Hit- tr|I1JJ39|I1JJ39_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.05,0,seg,NULL;
Cellulose_synt,Cellulose synthase; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; no des,CUFF.1227.1
(2529 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033786 similar to UniRef100_A7P8T8 Cluster: Chromosom... 428 e-119
gnl|LJGI|FS342964 similar to UniRef100_A7P8T8 Cluster: Chromosom... 383 e-105
gnl|LJGI|DC598741 homologue to UniRef100_A7PBB7 Cluster: Chromos... 94 5e-18
>gnl|LJGI|BP033786 similar to UniRef100_A7P8T8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 487
Score = 428 bits (216), Expect = e-119
Identities = 234/240 (97%)
Strand = Plus / Minus
Query: 2290 accagtgctcacttggctgctgtggtgcaagggctccttaaagtcatggctgggattgag 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 accagtgctcacttggctgctgtggtgcaagggctccttaaagtcatggctggtattgag 428
Query: 2350 atttcttttactctgacgtccaaatcaggaggggaagaagaggaagatatgtttgctgat 2409
|||||||||||| |||| |||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 427 atttcttttactttgacatccaaatcaggaggtgaagaagatgaagacatgtttgctgat 368
Query: 2410 ctgtatatagtcaagtggagctccttgatgattccaccgattgttattgccatgatgaac 2469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctgtatatagtcaagtggagctccttgatgattccaccgattgttattgccatgatgaac 308
Query: 2470 gtcattggcatcgcggtcgcattttcgagaaccatttacagtgcgaatcctcagtggagc 2529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtcattggcatcgcggtcgcattttcgagaaccatttacagtgcgaatcctcagtggagc 248
>gnl|LJGI|FS342964 similar to UniRef100_A7P8T8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 703
Score = 383 bits (193), Expect = e-105
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atgaaagctgaagaacaatacgtttccaattctttattcactggcggattcaacagtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atgaaagctgaagaacaatacgtttccaattctttattcactggcggattcaacagtgta 570
Query: 61 accagagcccatctaatggacaaggtgatcgattcagaagtcacacatcctcaaatggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 accagagcccatctaatggacaaggtgatcgattcagaagtcacacatcctcaaatggca 630
Query: 121 ggggccaaaggctctgcttgttcgatttgtgatggcaaggtcatgaaggatgagagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggggccaaaggctctgcttgttcgatttgtgatggcaaggtcatgaaggatgagagggga 690
Query: 181 catgacgtgactc 193
|||||||||||||
Sbjct: 691 catgacgtgactc 703
>gnl|LJGI|DC598741 homologue to UniRef100_A7PBB7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 139
Score = 93.7 bits (47), Expect = 5e-18
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 1330 tttgaaggaattgatccctcagacaggtatgcgaataacaatactgtattctttgatgga 1389
|||||||| ||||||||||| || || ||||| ||| |||| ||||| |||||||||| |
Sbjct: 5 tttgaagggattgatccctctgatagatatgctaatcacaacactgtcttctttgatgta 64
Query: 1390 aacatgcgagcccttgatggtgtccaaggtccagtctatgtgggaac 1436
|||||| |||||||||||||| | ||||| ||||| ||||| |||||
Sbjct: 65 aacatgagagcccttgatggtcttcaagggccagtgtatgtaggaac 111