Miyakogusa Predicted Gene
- Lj0g3v0021389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0021389.1 Non Chatacterized Hit- tr|D8RIM9|D8RIM9_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,46.21,6e-17,Clathrin_lg_ch,Clathrin light chain; seg,NULL;
coiled-coil,NULL; PROTEIN BINDING / PROTEIN TRANSPORT,CUFF.1189.1
(861 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72190 similar to UniRef100_A7Q3F1 Cluster: Chromosome... 1707 0.0
gnl|LJGI|BW605284 791 0.0
gnl|LJGI|BW626051 789 0.0
gnl|LJGI|TC71845 781 0.0
>gnl|LJGI|TC72190 similar to UniRef100_A7Q3F1 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1225
Score = 1707 bits (861), Expect = 0.0
Identities = 861/861 (100%)
Strand = Plus / Plus
Query: 1 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 126
Query: 61 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 186
Query: 121 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 246
Query: 181 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 306
Query: 241 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 366
Query: 301 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 426
Query: 361 gagaaggagaagaaggagaatgagacgcggttgcagatcttagaggaagctgatgagtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gagaaggagaagaaggagaatgagacgcggttgcagatcttagaggaagctgatgagtac 486
Query: 421 aaaattgggttttacaggaagcgtgaggttaatgttgagaacaccaaagcttctaacagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaaattgggttttacaggaagcgtgaggttaatgttgagaacaccaaagcttctaacagg 546
Query: 481 gaaagagagaagctatttttggcaagcggggagaagttccatgccgaagctgacaaaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gaaagagagaagctatttttggcaagcggggagaagttccatgccgaagctgacaaaaac 606
Query: 541 tactggaaggcaattggtgaactgatacctcatgaagtgcctgctatacagaaaagaggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tactggaaggcaattggtgaactgatacctcatgaagtgcctgctatacagaaaagaggg 666
Query: 601 aaaaaggacaaagagaaaaagccttccatcattgtaatacaggggccaaagccagggaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aaaaaggacaaagagaaaaagccttccatcattgtaatacaggggccaaagccagggaaa 726
Query: 661 cctactgacctttcaagaatgcgccagatattactgaagctcaagcataacccccctcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cctactgacctttcaagaatgcgccagatattactgaagctcaagcataacccccctcca 786
Query: 721 catatgaagcccaagcctcctccatcttcagaaaccaaaaaggatgctaaaactggacct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 catatgaagcccaagcctcctccatcttcagaaaccaaaaaggatgctaaaactggacct 846
Query: 781 cctgatgtagctggttcaagtactacacctcccaaggctgtggctgtggctacttcagag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 cctgatgtagctggttcaagtactacacctcccaaggctgtggctgtggctacttcagag 906
Query: 841 gcggttgctgtggcttgaggt 861
|||||||||||||||||||||
Sbjct: 907 gcggttgctgtggcttgaggt 927
>gnl|LJGI|BW605284
Length = 538
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Plus
Query: 1 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 199
Query: 61 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 259
Query: 121 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 319
Query: 181 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 379
Query: 241 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 439
Query: 301 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 499
Query: 361 gagaaggagaagaaggagaatgagacgcggttgcagatc 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gagaaggagaagaaggagaatgagacgcggttgcagatc 538
>gnl|LJGI|BW626051
Length = 511
Score = 789 bits (398), Expect = 0.0
Identities = 401/402 (99%)
Strand = Plus / Plus
Query: 1 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 169
Query: 61 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 229
Query: 121 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 289
Query: 181 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 349
Query: 241 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 409
Query: 301 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 469
Query: 361 gagaaggagaagaaggagaatgagacgcggttgcagatctta 402
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 470 gagaaggggaagaaggagaatgagacgcggttgcagatctta 511
>gnl|LJGI|TC71845
Length = 538
Score = 781 bits (394), Expect = 0.0
Identities = 394/394 (100%)
Strand = Plus / Plus
Query: 1 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgtcatccttcggcagctccggtcagccgttcgaagacgacggagtcttcctcggctac 204
Query: 61 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gatccccgactccagtcacagcgctttgactcgttctccaacttcgacgccgactcggtc 264
Query: 121 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggactcggccggtgacgatgcgttctcgtctcaggcggtgccggagactccttccccg 324
Query: 181 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccgccgatctactctgcaggtgcgggattcgccccgtactcaccagagcagaacggggag 384
Query: 241 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcgctggtggaggcttcgttgcttccgatggcccgatcttgccaccgccggcggatttc 444
Query: 301 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcgccggaagaggggtttgccttgagggagtggcgaagggagaacgcgattcgattggag 504
Query: 361 gagaaggagaagaaggagaatgagacgcggttgc 394
||||||||||||||||||||||||||||||||||
Sbjct: 505 gagaaggagaagaaggagaatgagacgcggttgc 538