Miyakogusa Predicted Gene
- Lj0g3v0021379.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0021379.1 tr|A9S5F6|A9S5F6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74828
,40,4e-18,Starch binding domain,Carbohydrate binding module family 20;
seg,NULL; Starch-binding domain-like,Ca,CUFF.1183.1
(1641 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78796 weakly similar to UniRef100_A7PP33 Cluster: Chr... 1322 0.0
gnl|LJGI|TC75113 weakly similar to UniRef100_A9SW46 Cluster: Pre... 88 2e-16
gnl|LJGI|TC76967 weakly similar to UniRef100_A7PP33 Cluster: Chr... 66 7e-10
>gnl|LJGI|TC78796 weakly similar to UniRef100_A7PP33 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 829
Score = 1322 bits (667), Expect = 0.0
Identities = 681/683 (99%), Gaps = 2/683 (0%)
Strand = Plus / Plus
Query: 1 atgaaagccctcaccagctatggttctaaggccatttctgagaggctaggagttcaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgaaagccctcaccagctatggttctaaggccatttctgagaggctaggagttcaagtc 196
Query: 61 ctacatgtttctgatagacccgagttttgtttctcccttcgtttcaggaatgatagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctacatgtttctgatagacccgagttttgtttctcccttcgtttcaggaatgatagaaaa 256
Query: 121 ggctccaacttttggctcctcaaactggtccaaaacaagggttattacccggttcatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggctccaacttttggctcctcaaactggtccaaaacaagggttattacccggttcatgct 316
Query: 181 ctgccagcaaaaacccaggtggacttggaagctgcggagccacaagttgcacaaagtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgccagcaaaaacccaggtggacttggaagctgcggagccacaagttgcacaaagtgaa 376
Query: 241 caaataaatgaatcaaagtttgttcgcgtagcatttcagttacaaaaagattgcgacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caaataaatgaatcaaagtttgttcgcgtagcatttcagttacaaaaagattgcgacttt 436
Query: 301 ggcgaacagtttctaatagttggggatcatcctatacttggttcctgggaacctactgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggcgaacagtttctaatagttggggatcatcctatacttggttcctgggaacctactgaa 496
Query: 361 gcgttgccaatgacatggtctgatgggcatgtatggactattgagctggatatgcctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gcgttgccaatgacatggtctgatgggcatgtatggactattgagctggatatgcctgtt 556
Query: 421 ggagagtcaatcctgttcaaattcatactgaaaggaaaagaaggtgatattatatggcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggagagtcaatcctgttcaaattcatactgaaaggaaaagaaggtgatattatatggcag 616
Query: 481 ccaggttcggatcgagttatcaacacttgggaaactatgaataagatcatagtttttgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ccaggttcggatcgagttatcaacacttgggaaactatgaataagatcatagtttttgag 676
Query: 541 gattgggagaatgctgaacttcaggaaataatagaggaagatcaattttctc-aatcaaa 599
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 677 gattgggagaatgctgaacttcaggaaataatagaggaagatcaattttctctaatcaaa 736
Query: 600 tgagaaaccccaggataactcagaagtgctaatttctgctgaaattttgaataatcctcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgagaaaccccaggataactcagaagtgctaatttctgctgaaattttgaataatcctcc 796
Query: 660 agaggcactggaatcaaatgaga 682
||| |||||||||||||||||||
Sbjct: 797 aga-gcactggaatcaaatgaga 818
Score = 141 bits (71), Expect = 2e-32
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 671 aatcaaatgagaaaccccaggataactcagaagtgctaatttctgctgaaattttgaata 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 aatcaaatgagaaaccccaggataactcagaagtgctaatttctgctgaaattttgaata 789
Query: 731 atcctcaagaggatctggaatcaaatg 757
|||||| |||| | |||||||||||||
Sbjct: 790 atcctccagagca-ctggaatcaaatg 815
>gnl|LJGI|TC75113 weakly similar to UniRef100_A9SW46 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(15%)
Length = 635
Score = 87.7 bits (44), Expect = 2e-16
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 118 aaaggctccaacttttggctcctcaaactggtccaaaacaagggttattacccggttcat 177
||||||||||||||| | |||||||| ||| ||||||||| | |||||| ||||||
Sbjct: 458 aaaggctccaactttcagttcctcaaattggcacaaaacaagcgcatttaccctgttcat 399
Query: 178 gctctgccagcaaaaacccaggtggacttgga 209
||||||||||| ||||||||||||||||||||
Sbjct: 398 gctctgccagccaaaacccaggtggacttgga 367
>gnl|LJGI|TC76967 weakly similar to UniRef100_A7PP33 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 708
Score = 65.9 bits (33), Expect = 7e-10
Identities = 165/209 (78%)
Strand = Plus / Plus
Query: 377 ggtctgatgggcatgtatggactattgagctggatatgcctgttggagagtcaatcctgt 436
|||| ||||||||||| |||||| | |||| | | || |||| ||| ||||||||| |
Sbjct: 9 ggtcagatgggcatgtttggactgtagagcagaacattcctgctgggaagtcaatccaat 68
Query: 437 tcaaattcatactgaaaggaaaagaaggtgatattatatggcagccaggttcggatcgag 496
|||||||||| |||||| |||||| |||||| || ||||||||||| || ||| ||
Sbjct: 69 tcaaattcatcctgaaaagaaaaggaggtgaagtttattggcagccagggtcagatagaa 128
Query: 497 ttatcaacacttgggaaactatgaataagatcatagtttttgaggattgggagaatgctg 556
| | |||||||||||| ||||| | |||| ||| |||||||||||||||||||
Sbjct: 129 ctctgcacacttgggaaaacatgaacagaatcactatttgtgaggattgggagaatgctc 188
Query: 557 aacttcaggaaataatagaggaagatcaa 585
| |||||| | ||||| ||||||| ||||
Sbjct: 189 agcttcagaagataattgaggaaggtcaa 217