Miyakogusa Predicted Gene

Lj0g3v0021209.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0021209.1 tr|A9TM45|A9TM45_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_196332,39.68,0.000000000000005, ,CUFF.1170.1
         (486 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81448 weakly similar to UniRef100_Q0JMT8 Cluster: Os0...   963   0.0  
gnl|LJGI|TC61683 similar to UniRef100_A7NYK9 Cluster: Chromosome...    92   4e-18

>gnl|LJGI|TC81448 weakly similar to UniRef100_Q0JMT8 Cluster: Os01g0362000 protein;
           n=1; Oryza sativa Japonica Group|Rep: Os01g0362000
           protein - Oryza sativa subsp. japonica (Rice), partial
           (68%)
          Length = 1000

 Score =  963 bits (486), Expect = 0.0
 Identities = 486/486 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttccctaagcgttttcaggaccccaaatcaggctttattcttctaagttcaatgcgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgttccctaagcgttttcaggaccccaaatcaggctttattcttctaagttcaatgcgt 188

                                                                       
Query: 61  gccaagaaatacatgaacaaaattgggttggaaggagaagattatcacttcttcaaacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gccaagaaatacatgaacaaaattgggttggaaggagaagattatcacttcttcaaacaa 248

                                                                       
Query: 121 gttgggaaggccttactttgcacctatgccatacttggggctctgtggctctccaatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gttgggaaggccttactttgcacctatgccatacttggggctctgtggctctccaatgag 308

                                                                       
Query: 181 aattcaacaatggactgggggaaactgaagccatggccgaaagaagagcttgtgcaagac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aattcaacaatggactgggggaaactgaagccatggccgaaagaagagcttgtgcaagac 368

                                                                       
Query: 241 caattgtcccggatccgggaattcctgcatttgggtgataaaggaccggaggagttcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caattgtcccggatccgggaattcctgcatttgggtgataaaggaccggaggagttcact 428

                                                                       
Query: 301 gacaagggactgatgatcggagctaccagtggtctgaaaggggtggatgagagtgataag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gacaagggactgatgatcggagctaccagtggtctgaaaggggtggatgagagtgataag 488

                                                                       
Query: 361 gacgcggagaataaccagaaggaactgcagagcaagaagtttgatcaggaagctcagaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gacgcggagaataaccagaaggaactgcagagcaagaagtttgatcaggaagctcagaac 548

                                                                       
Query: 421 ctgtggttgaagatgaggaatgaggtcattgctgaacttaaagagaagggctttgatgtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctgtggttgaagatgaggaatgaggtcattgctgaacttaaagagaagggctttgatgtg 608

                 
Query: 481 gaatga 486
           ||||||
Sbjct: 609 gaatga 614


>gnl|LJGI|TC61683 similar to UniRef100_A7NYK9 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 739

 Score = 91.7 bits (46), Expect = 4e-18
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                       
Query: 393 caagaagtttgatcaggaagctcagaacctgtggttgaagatgaggaatgaggtcattgc 452
           |||||||||||| |||||||||||||| ||||||  || ||||||||  |||||| ||||
Sbjct: 440 caagaagtttgagcaggaagctcagaagctgtgggcgaggatgaggagcgaggtcgttgc 499

                                         
Query: 453 tgaacttaaagagaagggctttgatgtgga 482
           ||| ||| | ||||||||||||||||||||
Sbjct: 500 tgagcttcaggagaagggctttgatgtgga 529