Miyakogusa Predicted Gene

Lj0g3v0020949.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0020949.1 tr|A4F8X3|A4F8X3_SACEN Succinate dehydrogenase
flavoprotein subunit OS=Saccharopolyspora erythraea
(,24.29,3.7,seg,NULL,gene.g1875.t1.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW624254 weakly similar to UniRef100_Q5ZD27 Cluster: Sp...    74   7e-13

>gnl|LJGI|BW624254 weakly similar to UniRef100_Q5ZD27 Cluster: Splicing coactivator
           subunit-like protein; n=1; Oryza sativa Japonica
           Group|Rep: Splicing coactivator subunit-like protein -
           Oryza sativa subsp. japonica (Rice), partial (13%)
          Length = 469

 Score = 73.8 bits (37), Expect = 7e-13
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                
Query: 1   atgcctacatactgctttgatttagggaaaagatatg 37
           |||||||||||||||||||||||||||||||||||||
Sbjct: 344 atgcctacatactgctttgatttagggaaaagatatg 308