Miyakogusa Predicted Gene
- Lj0g3v0020899.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0020899.1 tr|F2DTA3|F2DTA3_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,41.1,2e-18,DUF179,Protein
of unknown function DUF179; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,NODE_6563_length_695_cov_314.516541.path1.1
(699 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75674 weakly similar to UniRef100_A7P8F0 Cluster: Chr... 827 0.0
gnl|LJGI|BG662125 similar to UniRef100_A9RVW3 Cluster: Predicted... 394 e-109
gnl|LJGI|TC74516 76 3e-13
>gnl|LJGI|TC75674 weakly similar to UniRef100_A7P8F0 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 455
Score = 827 bits (417), Expect = 0.0
Identities = 417/417 (100%)
Strand = Plus / Plus
Query: 1 atggaagcttgttttctcacccatagttccttcatcaaaacgccagatcaactcattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggaagcttgttttctcacccatagttccttcatcaaaacgccagatcaactcattcct 98
Query: 61 tcaatcagagccgggtctcttgcatactcaaagtcaaagagaccttcccaacaattccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tcaatcagagccgggtctcttgcatactcaaagtcaaagagaccttcccaacaattccag 158
Query: 121 agcagaaaagtagggattccatttactgtatcatgttgtcaattttcatcctcatccggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agcagaaaagtagggattccatttactgtatcatgttgtcaattttcatcctcatccggt 218
Query: 181 gaagacaaaccaattgttaatgctgattggcgatctttccgtgcaaaactggtggctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gaagacaaaccaattgttaatgctgattggcgatctttccgtgcaaaactggtggctgga 278
Query: 241 gagcaaattctaaagcctgaggtgccttataccgtgactgatccagacactgttgtggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gagcaaattctaaagcctgaggtgccttataccgtgactgatccagacactgttgtggat 338
Query: 301 ccttctccactcatcaccattggtgataaatgggctcacataatccatgaacctgaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccttctccactcatcaccattggtgataaatgggctcacataatccatgaacctgaaagg 398
Query: 361 ggttgcttactcatagccacagagaagcttgatggggtccacatttttgaacggacg 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggttgcttactcatagccacagagaagcttgatggggtccacatttttgaacggacg 455
>gnl|LJGI|BG662125 similar to UniRef100_A9RVW3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(5%)
Length = 371
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 185 acaaaccaattgttaatgctgattggcgatctttccgtgcaaaactggtggctggagagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 acaaaccaattgttaatgctgattggcgatctttccgtgcaaaactggtggctggagagc 228
Query: 245 aaattctaaagcctgaggtgccttataccgtgactgatccagacactgttgtggatcctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aaattctaaagcctgaggtgccttataccgtgactgatccagacactgttgtggatcctt 288
Query: 305 ctccactcatcaccattggtgataaatgggctcacataatccatgaacctgaaaggggtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctccactcatcaccattggtgataaatgggctcacataatccatgaacctgaaaggggtt 348
Query: 365 gcttactcatagccacaga 383
|||||||||||||||||||
Sbjct: 349 gcttactcatagccacaga 367
Score = 305 bits (154), Expect = 2e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 atggaagcttgttttctcacccatagttccttcatcaaaacgccagatcaactcattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 atggaagcttgttttctcacccatagttccttcatcaaaacgccagatcaactcattcct 74
Query: 61 tcaatcagagccgggtctcttgcatactcaaagtcaaagagaccttcccaacaattccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tcaatcagagccgggtctcttgcatactcaaagtcaaagagaccttcccaacaattccag 134
Query: 121 agcagaaaagtagggattccatttactgtatcat 154
||||||||||||||||||||||||||||||||||
Sbjct: 135 agcagaaaagtagggattccatttactgtatcat 168
>gnl|LJGI|TC74516
Length = 537
Score = 75.8 bits (38), Expect = 3e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 659 tgatgaaggggttgtattatggggcaaaggaaagtgtgggt 699
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 tgatgaaggggttgtattatggggcnaaggaaagtgtgggt 41