Miyakogusa Predicted Gene

Lj0g3v0020849.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0020849.1 Non Chatacterized Hit- tr|H3GQR2|H3GQR2_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,60.98,1e-18,DUF382,Domain of unknown function DUF382; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.1158.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proli...   561   e-159

>gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
           Medicago truncatula|Rep: PSP, proline-rich - Medicago
           truncatula (Barrel medic), partial (42%)
          Length = 1189

 Score =  561 bits (283), Expect = e-159
 Identities = 321/333 (96%), Gaps = 3/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 10  aaaatggtcatagactatcaggttcttcatgatgcatttttcaagtaccagacaaagcca 69
           ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaatggacatagactatcagattcttcatgatgcatttttcaagtaccagacaaagcca 560

                                                                       
Query: 70  aaactgacttctctaggggagctgtatcatgaaggaaaagaatttgaggtaaagttgagg 129
           || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagctgacttctcttggggagctgtatcatgaaggaaaagaatttgaggtaaagttgagg 620

                                                                       
Query: 130 gagatgaaacctgacatgttatcacatgaattgaaagaagctcctggcatgcctgagggt 189
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 gagatgaaacctgacatgttatcacatgaattgaaagaagctcctggtatgcctgagggt 680

                                                                       
Query: 190 gcccctcctaactat---gaggagccagtttttaataccaaacactggggtgatctggag 246
           |||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gccccttctaactatgaggaggagccagtttttaataccaaacactggggtgatctggag 740

                                                                       
Query: 247 gagaaggacgaagaagaggaacttgaagctggtacttatgtttttaatctctcaagatat 306
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 gagaaggacgaagaagaggaacttgaagctggtacttatgtttttaatctctcaaggtat 800

                                            
Query: 307 gaaaagccaaggccggaagagaagctgcgtagt 339
           |||||||||||||| ||||||||| ||||||||
Sbjct: 801 gaaaagccaaggccagaagagaagttgcgtagt 833