Miyakogusa Predicted Gene
- Lj0g3v0020729.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0020729.1 tr|G9FTF9|G9FTF9_SOYBN Expansin A5a OS=Glycine
max GN=EXPA5a PE=2 SV=1,95.93,0,PHL pollen allergen,Pollen
allergen/expansin, C-terminal; Barwin-like
endoglucanases,Barwin-related
,NODE_43967_length_1159_cov_158.011215.path1.1
(375 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73866 similar to UniRef100_A7NYZ1 Cluster: Chromosome... 714 0.0
gnl|LJGI|TC68635 homologue to UniRef100_Q2V728 Cluster: Expansin... 615 e-176
gnl|LJGI|TC65101 similar to UniRef100_Q6J4U6 Cluster: Expansin 1... 295 1e-79
gnl|LJGI|TC58153 homologue to UniRef100_A7NYZ1 Cluster: Chromoso... 252 1e-66
gnl|LJGI|TC77104 homologue to UniRef100_Q06BI7 Cluster: Ripening... 153 9e-37
gnl|LJGI|AV774298 homologue to UniRef100_Q6TPK1 Cluster: EXP1; n... 125 2e-28
gnl|LJGI|TC68615 similar to UniRef100_A4GWU6 Cluster: Expansin; ... 119 1e-26
>gnl|LJGI|TC73866 similar to UniRef100_A7NYZ1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 993
Score = 714 bits (360), Expect = 0.0
Identities = 373/376 (99%), Gaps = 1/376 (0%)
Strand = Plus / Plus
Query: 1 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 601
Query: 61 cgggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cgggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttc 661
Query: 121 aacctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgcacctacgtgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aacctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgcacctacgtgaag 721
Query: 181 ggcacccgaaccggttggatgccgatgagtaggaactggggtcaaaattggcagtcaaac 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 722 ggcacccgaaccggttggatgccgatgagtaggaactggggtcgaaattggcagtcacac 781
Query: 241 gccgttttggtgggccaggccctgtcattccgtgtcaccgccagcgaccgtcgcacgtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gccgttttggtgggccaggccctgtcattccgtgtcaccgccagcgaccgtcgcacgtcc 841
Query: 301 acctcctggaacattgctccggcacattggcaattcggtcaaactttcaccgggaaga-a 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 842 acctcctggaacattgctccggcacattggcaattcggtcaaactttcaccgggaagaga 901
Query: 360 tttccgggtctaataa 375
||||||||||||||||
Sbjct: 902 tttccgggtctaataa 917
>gnl|LJGI|TC68635 homologue to UniRef100_Q2V728 Cluster: Expansin 5; n=1; Cucumis
sativus|Rep: Expansin 5 - Cucumis sativus (Cucumber),
partial (95%)
Length = 815
Score = 615 bits (310), Expect = e-176
Identities = 313/314 (99%)
Strand = Plus / Plus
Query: 62 gggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttca 67
Query: 122 acctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgcacctacgtgaagg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgcacctacgtgaagg 127
Query: 182 gcacccgaaccggttggatgccgatgagtaggaactggggtcaaaattggcagtcaaacg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 128 gcacccgaaccggttggatgccgatgagtaggaactggggtcaaaattggcagtccaacg 187
Query: 242 ccgttttggtgggccaggccctgtcattccgtgtcaccgccagcgaccgtcgcacgtcca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccgttttggtgggccaggccctgtcattccgtgtcaccgccagcgaccgtcgcacgtcca 247
Query: 302 cctcctggaacattgctccggcacattggcaattcggtcaaactttcaccgggaagaatt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cctcctggaacattgctccggcacattggcaattcggtcaaactttcaccgggaagaatt 307
Query: 362 tccgggtctaataa 375
||||||||||||||
Sbjct: 308 tccgggtctaataa 321
>gnl|LJGI|TC65101 similar to UniRef100_Q6J4U6 Cluster: Expansin 1; n=1; Mangifera
indica|Rep: Expansin 1 - Mangifera indica (Mango),
complete
Length = 1288
Score = 295 bits (149), Expect = 1e-79
Identities = 311/365 (85%)
Strand = Plus / Plus
Query: 1 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 455 atgcccatgttccttaagatcgctgagtaccgcgccggcatcgtccccgttgcgtttcgc 514
Query: 61 cgggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttc 120
||||||||||| || |||| ||||||||| |||||||| ||||||||| |||||||||
Sbjct: 515 cgggtgccatgtagaaagcgtggtgggataaggttcaccatcaacggccaacgttacttc 574
Query: 121 aacctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgcacctacgtgaag 180
||||| || || || |||||||| || |||||||||||| |||||||| | || || ||
Sbjct: 575 aacctggtgctcattagcaacgtggcaggtgcaggggatattgtgcgcgcatatgtaaaa 634
Query: 181 ggcacccgaaccggttggatgccgatgagtaggaactggggtcaaaattggcagtcaaac 240
||| |||||||||| ||||| || ||||| |||||||||| || |||||||| || |||
Sbjct: 635 ggctcccgaaccggatggattccaatgagccggaactgggggcagaattggcaatcgaac 694
Query: 241 gccgttttggtgggccaggccctgtcattccgtgtcaccgccagcgaccgtcgcacgtcc 300
|| |||||||||||||| || || || |||||||| || | |||||||| ||||| |||
Sbjct: 695 gcggttttggtgggccaagctctttccttccgtgttactggtagcgaccgccgcacctcc 754
Query: 301 acctcctggaacattgctccggcacattggcaattcggtcaaactttcaccgggaagaat 360
||||| |||||||| ||||| || |||||||||||| |||||||||| ||| ||||||
Sbjct: 755 acctcatggaacatcgctcccgctggttggcaattcgggcaaactttcatcggaaagaat 814
Query: 361 ttccg 365
|||||
Sbjct: 815 ttccg 819
>gnl|LJGI|TC58153 homologue to UniRef100_A7NYZ1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 1128
Score = 252 bits (127), Expect = 1e-66
Identities = 310/371 (83%)
Strand = Plus / Plus
Query: 1 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 60
||||| |||||||||||||||||| |||||||||||||||||||||||||| | || |||
Sbjct: 464 atgcctatgttcctcaagatcgctcagtaccgcgccggcatcgtccccgtctcttaccgc 523
Query: 61 cgggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttc 120
||||| ||||||||||||| || ||||| |||||||| |||||||||||||||||||||
Sbjct: 524 cgggtaccatgcaggaagcaaggagggataaggttcacgatcaacggcttccgttacttc 583
Query: 121 aacctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgcacctacgtgaag 180
||||| |||||||||| ||||||||| || ||||||||| | ||| | || ||||||
Sbjct: 584 aacctggttctgatcaccaacgtcgcaggagcaggggatatcgtgaggactagcgtgaaa 643
Query: 181 ggcacccgaaccggttggatgccgatgagtaggaactggggtcaaaattggcagtcaaac 240
|| | |||||| |||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 644 ggttcaaaaaccgggtggatgagtatgagcagaaactggggtcagaactggcagtcaaac 703
Query: 241 gccgttttggtgggccaggccctgtcattccgtgtcaccgccagcgaccgtcgcacgtcc 300
| ||| |||| || ||| | ||||||||| | || || ||||| ||||| ||||| |||
Sbjct: 704 tctgttctggttggtcagtcactgtcattcagggtgacagccagtgaccgacgcacttcc 763
Query: 301 acctcctggaacattgctccggcacattggcaattcggtcaaactttcaccgggaagaat 360
|| || | |||||||| ||| | ||||||||||| || ||||||||||| |||||||||
Sbjct: 764 acatcattgaacattgttccatcccattggcaatttggacaaactttcactgggaagaat 823
Query: 361 ttccgggtcta 371
||| |||||||
Sbjct: 824 ttcagggtcta 834
>gnl|LJGI|TC77104 homologue to UniRef100_Q06BI7 Cluster: Ripening-related expansin;
n=1; Cucumis melo|Rep: Ripening-related expansin -
Cucumis melo (Muskmelon), partial (78%)
Length = 606
Score = 153 bits (77), Expect = 9e-37
Identities = 293/365 (80%)
Strand = Plus / Plus
Query: 1 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 60
||||| |||||||||||||||||| ||||||| ||||| |||||||||||||| || |||
Sbjct: 242 atgccaatgttcctcaagatcgctcagtaccgtgccggaatcgtccccgtcgcttaccgc 301
Query: 61 cgggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttc 120
||||| ||||| || || ||| || || | ||||| |||||||| ||||||||||||
Sbjct: 302 cgggtaccatgtagaaaaagtggaggcattcgattcacgatcaacggtttccgttacttc 361
Query: 121 aacctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgcacctacgtgaag 180
||||| || || |||| |||||||||||||||||||||| | |||||| ||||||
Sbjct: 362 aacctggtgctaatcaccaacgtcgcgggtgcaggggatatcgtgcgcgtgagcgtgaaa 421
Query: 181 ggcacccgaaccggttggatgccgatgagtaggaactggggtcaaaattggcagtcaaac 240
|| | |||| |||||| |||||| | |||||||| ||||||||||| || |||
Sbjct: 422 ggaggcaacaccgcgtggatgagtatgagtcgtaactgggggcaaaattggcaatccaac 481
Query: 241 gccgttttggtgggccaggccctgtcattccgtgtcaccgccagcgaccgtcgcacgtcc 300
| ||||||||||||||| |||| || || | ||||||| ||| ||||| ||||| ||
Sbjct: 482 tctgttttggtgggccagaccctctcctttagggtcaccggcagtgaccgacgcacctca 541
Query: 301 acctcctggaacattgctccggcacattggcaattcggtcaaactttcaccgggaagaat 360
|| || |||||| | || || || ||||||| ||||| ||||| |||||||| ||||||
Sbjct: 542 acgtcatggaacgtggcaccagctaattggcagttcggacaaaccttcaccggaaagaat 601
Query: 361 ttccg 365
|||||
Sbjct: 602 ttccg 606
>gnl|LJGI|AV774298 homologue to UniRef100_Q6TPK1 Cluster: EXP1; n=1; Actinidia
deliciosa|Rep: EXP1 - Actinidia deliciosa (Kiwi),
partial (50%)
Length = 482
Score = 125 bits (63), Expect = 2e-28
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 316
Query: 61 cgg 63
|||
Sbjct: 317 cgg 319
>gnl|LJGI|TC68615 similar to UniRef100_A4GWU6 Cluster: Expansin; n=1; Litchi
chinensis|Rep: Expansin - Litchi chinensis (Lychee),
partial (95%)
Length = 1302
Score = 119 bits (60), Expect = 1e-26
Identities = 141/168 (83%)
Strand = Plus / Plus
Query: 1 atgcccatgttcctcaagatcgctgagtaccgcgccggcatcgtccccgtcgcctatcgc 60
|||||||||||||||||||||||| ||||||||||||| |||||||| || | || ||
Sbjct: 476 atgcccatgttcctcaagatcgctcagtaccgcgccggaatcgtcccggtgacttaccgt 535
Query: 61 cgggtgccatgcaggaagcctggtgggatcaggttcacaatcaacggcttccgttacttc 120
||||| ||||| || ||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 536 cgggtcccatgtagaaagaagggtggaatcagattcaccatcaacggtttccgctacttc 595
Query: 121 aacctagttctgatcagcaacgtcgcgggtgcaggggatgttgtgcgc 168
||| | ||| | |||||||||||||| |||||||| ||| | ||||||
Sbjct: 596 aacttggttttaatcagcaacgtcgcaggtgcaggtgatatcgtgcgc 643