Miyakogusa Predicted Gene

Lj0g3v0019949.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0019949.1 Non Chatacterized Hit- tr|D8U9J1|D8U9J1_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,37.9,1e-18,TAFII55_N,TAFII55 protein, conserved region;
TRANSCRIPTION INITIATION FACTOR TFIID 55 KD
SUBUNIT-REL,NODE_21185_length_1088_cov_106.576286.path1.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63690 similar to UniRef100_A7P060 Cluster: Chromosome...   737   0.0  
gnl|LJGI|TC76853 similar to UniRef100_A7P060 Cluster: Chromosome...   525   e-149

>gnl|LJGI|TC63690 similar to UniRef100_A7P060 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (97%)
          Length = 1118

 Score =  737 bits (372), Expect = 0.0
 Identities = 372/372 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggagcaattcatacttagagttccacctaatgtcgcggagcggatagagcgtctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atggaggagcaattcatacttagagttccacctaatgtcgcggagcggatagagcgtctt 296

                                                                       
Query: 61  ctgaatgaaaacaatccttcttcatctgaagacaagtcattagatttgtcatttaatgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctgaatgaaaacaatccttcttcatctgaagacaagtcattagatttgtcatttaatgag 356

                                                                       
Query: 121 gatggaaggagcggtacatttgcgatcgaggatgagcacttcccagcttctttattagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gatggaaggagcggtacatttgcgatcgaggatgagcacttcccagcttctttattagac 416

                                                                       
Query: 181 cttccttgtgtcgttgaatcatacaagacttatgatgacaactctttgattaagagtgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cttccttgtgtcgttgaatcatacaagacttatgatgacaactctttgattaagagtgct 476

                                                                       
Query: 241 gatattggtcagatgattatggtgagggaatctggtgatgctgctccagatgagattgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gatattggtcagatgattatggtgagggaatctggtgatgctgctccagatgagattgag 536

                                                                       
Query: 301 tacaggcatggccttacccctcccatgagagatgctcgcaagcgtagattccgcagagaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tacaggcatggccttacccctcccatgagagatgctcgcaagcgtagattccgcagagaa 596

                       
Query: 361 cctgatcttaat 372
           ||||||||||||
Sbjct: 597 cctgatcttaat 608


>gnl|LJGI|TC76853 similar to UniRef100_A7P060 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (59%)
          Length = 435

 Score =  525 bits (265), Expect = e-149
 Identities = 265/265 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggagcaattcatacttagagttccacctaatgtcgcggagcggatagagcgtctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggaggagcaattcatacttagagttccacctaatgtcgcggagcggatagagcgtctt 230

                                                                       
Query: 61  ctgaatgaaaacaatccttcttcatctgaagacaagtcattagatttgtcatttaatgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ctgaatgaaaacaatccttcttcatctgaagacaagtcattagatttgtcatttaatgag 290

                                                                       
Query: 121 gatggaaggagcggtacatttgcgatcgaggatgagcacttcccagcttctttattagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gatggaaggagcggtacatttgcgatcgaggatgagcacttcccagcttctttattagac 350

                                                                       
Query: 181 cttccttgtgtcgttgaatcatacaagacttatgatgacaactctttgattaagagtgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cttccttgtgtcgttgaatcatacaagacttatgatgacaactctttgattaagagtgct 410

                                    
Query: 241 gatattggtcagatgattatggtga 265
           |||||||||||||||||||||||||
Sbjct: 411 gatattggtcagatgattatggtga 435