Miyakogusa Predicted Gene
- Lj0g3v0018509.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0018509.1 Non Chatacterized Hit- tr|K3XFY2|K3XFY2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si000801,36.6,1e-18,seg,NULL,CUFF.1073.1
(657 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64547 similar to UniRef100_A7NYF6 Cluster: Chromosome... 1255 0.0
gnl|LJGI|GO004918 similar to UniRef100_A7NYF6 Cluster: Chromosom... 785 0.0
>gnl|LJGI|TC64547 similar to UniRef100_A7NYF6 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 859
Score = 1255 bits (633), Expect = 0.0
Identities = 649/657 (98%)
Strand = Plus / Plus
Query: 1 atgaagaacgcgcggaggaagaagaaacagaagccaccaccgaacaaggttgaggacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgaagaacgcgcggaggaagaagaaacagaagccaccaccgaacaaggttgaggacaaa 234
Query: 61 aaaggggtcgttgnnnnnnnncctgcagaagaagaagagacaaaacgcatcgttttggag 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aaaggggtcgttgaaaaaaaacctgcagaagaagaagagacaaaacgcatcgttttggag 294
Query: 121 gcgttggttgaagcgttctccttatcttccatcgacgaagctgcaatggcttacaccgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gcgttggttgaagcgttctccttatcttccatcgacgaagctgcaatggcttacaccgtt 354
Query: 181 gccggaggtgatcccggcaaggcttcggagattctccggcgaggtttaaccgacaccgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gccggaggtgatcccggcaaggcttcggagattctccggcgaggtttaaccgacaccgct 414
Query: 241 gaggactcctttttcccttcttcttctgcttcttcgtcaagcggtggcagcagtggggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gaggactcctttttcccttcttcttctgcttcttcgtcaagcggtggcagcagtggggtt 474
Query: 301 tcttccgggttggatttttcctcctccacttcgggttcctctgacgggtttctggagccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcttccgggttggatttttcctcctccacttcgggttcctctgacgggtttctggagccg 534
Query: 361 agttttggggatttcaaagggggtaagcagaagaagaaggtggtcgccgccgcgggtact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agttttggggatttcaaagggggtaagcagaagaagaaggtggtcgccgccgcgggtact 594
Query: 421 gtttcaacggtgttggggaaagagtatgtgaggaggaatgcaaccaggaacaaagggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gtttcaacggtgttggggaaagagtatgtgaggaggaatgcaaccaggaacaaagggttt 654
Query: 481 cggaatgggtttgtggagaaggaagatgcagagcagtttctctgctccatgcttggagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cggaatgggtttgtggagaaggaagatgcagagcagtttctctgctccatgcttggagat 714
Query: 541 gattgtgaccttaatctcgctgttgttagagatgttctttgtcagtgcggatatgacatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gattgtgaccttaatctcgctgttgttagagatgttctttgtcagtgcggatatgacatt 774
Query: 601 gaaaaggccatggatgtattacttgacttatctgcgtccacaagtgaccaatccggt 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gaaaaggccatggatgtattacttgacttatctgcgtccacaagtgaccaatccggt 831
>gnl|LJGI|GO004918 similar to UniRef100_A7NYF6 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 719
Score = 785 bits (396), Expect = 0.0
Identities = 399/400 (99%)
Strand = Plus / Plus
Query: 258 ttcttcttctgcttcttcgtcaagcggtggcagcagtggggtttcttccgggttggattt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ttcttcttctgcttcttcgtcaagcggtggcagcagtggggtttcttccgggttggattt 96
Query: 318 ttcctcctccacttcgggttcctctgacgggtttctggagccgagttttggggatttcaa 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ttcctcctccacttcgggttcctctgacgggtttctggagccgagttttggggatttcaa 156
Query: 378 agggggtaagcagaagaagaaggtggtcgccgccgcgggtactgtttcaacggtgttggg 437
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 agggggtaagtagaagaagaaggtggtcgccgccgcgggtactgtttcaacggtgttggg 216
Query: 438 gaaagagtatgtgaggaggaatgcaaccaggaacaaagggtttcggaatgggtttgtgga 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaaagagtatgtgaggaggaatgcaaccaggaacaaagggtttcggaatgggtttgtgga 276
Query: 498 gaaggaagatgcagagcagtttctctgctccatgcttggagatgattgtgaccttaatct 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gaaggaagatgcagagcagtttctctgctccatgcttggagatgattgtgaccttaatct 336
Query: 558 cgctgttgttagagatgttctttgtcagtgcggatatgacattgaaaaggccatggatgt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cgctgttgttagagatgttctttgtcagtgcggatatgacattgaaaaggccatggatgt 396
Query: 618 attacttgacttatctgcgtccacaagtgaccaatccggt 657
||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 attacttgacttatctgcgtccacaagtgaccaatccggt 436