Miyakogusa Predicted Gene

Lj0g3v0018409.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0018409.1 Non Chatacterized Hit- tr|E1KUS9|E1KUS9_9BACT
Putative uncharacterized protein OS=Prevotella
disiens,45.45,1.1,seg,NULL,CUFF.1066.1
         (180 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64874 similar to UniRef100_A7NYF4 Cluster: Peptidyl-p...   309   3e-84

>gnl|LJGI|TC64874 similar to UniRef100_A7NYF4 Cluster: Peptidyl-prolyl cis-trans
           isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
           cis-trans isomerase - Vitis vinifera (Grape), partial
           (95%)
          Length = 1003

 Score =  309 bits (156), Expect = 3e-84
 Identities = 156/156 (100%)
 Strand = Plus / Plus

                                                                       
Query: 25  agtcactcgcatcacactcacacacacctaagcggcgaaactgagatcatagagcaaacc 84
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   agtcactcgcatcacactcacacacacctaagcggcgaaactgagatcatagagcaaacc 62

                                                                       
Query: 85  aaccgatggcaaaaacgacgtcgttgctgctctgcacagtgcttctcttcgcaaccctcg 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  aaccgatggcaaaaacgacgtcgttgctgctctgcacagtgcttctcttcgcaaccctcg 122

                                               
Query: 145 ctctcatccaggcaaagaagtcgaaggaggatttga 180
           ||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctctcatccaggcaaagaagtcgaaggaggatttga 158