Miyakogusa Predicted Gene
- Lj0g3v0017359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0017359.1 tr|G7JZQ8|G7JZQ8_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_5g073370 PE=4 SV=1,59.46,0.003,
,CUFF.972.1
(300 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76992 similar to UniRef100_A0KCX4 Cluster: Binding-pr... 595 e-170
gnl|LJGI|BP043886 208 1e-53
gnl|LJGI|BP055161 172 8e-43
gnl|LJGI|TC81287 167 5e-41
gnl|LJGI|TC58099 weakly similar to UniRef100_A4IG17 Cluster: LOC... 125 2e-28
gnl|LJGI|TC77884 113 6e-25
gnl|LJGI|TC73313 92 2e-18
>gnl|LJGI|TC76992 similar to UniRef100_A0KCX4 Cluster: Binding-protein-dependent
transport systems inner membrane component; n=2;
Burkholderia cenocepacia|Rep: Binding-protein-dependent
transport systems inner membrane component -
Burkholderia cenocepacia (strain HI2424), partial (5%)
Length = 1195
Score = 595 bits (300), Expect = e-170
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 1 atgcatcaactcctactacagagaaatgcccgctttcgaaatttaatcaaccttaagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atgcatcaactcctactacagagaaatgcccgctttcgaaatttaatcaaccttaagcta 574
Query: 61 acctttgtttgcttccctggctgggttggtgtaatggaagcgctcccttattgtcccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acctttgtttgcttccctggctgggttggtgtaatggaagcgctcccttattgtcccaag 634
Query: 121 cttcaaactcttgccattgaaaaggagatcgacattgggtgttggttgaaacaacgcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cttcaaactcttgccattgaaaaggagatcgacattgggtgttggttgaaacaacgcaaa 694
Query: 181 gtcatgaaagagatgtttgttagcgtaatgatgatctaccgtgctaattgcaatgtcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gtcatgaaagagatgtttgttagcgtaatgatgatctaccgtgctaattgcaatgtcaag 754
Query: 241 aggattacatggtcaaaagccaaatggaatactataaagtacttctctgattgttaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aggattacatggtcaaaagccaaatggaatactataaagtacttctctgattgttaattt 814
>gnl|LJGI|BP043886
Length = 554
Score = 208 bits (105), Expect = 1e-53
Identities = 105/105 (100%)
Strand = Plus / Minus
Query: 196 tttgttagcgtaatgatgatctaccgtgctaattgcaatgtcaagaggattacatggtca 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tttgttagcgtaatgatgatctaccgtgctaattgcaatgtcaagaggattacatggtca 413
Query: 256 aaagccaaatggaatactataaagtacttctctgattgttaattt 300
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaagccaaatggaatactataaagtacttctctgattgttaattt 368
>gnl|LJGI|BP055161
Length = 504
Score = 172 bits (87), Expect = 8e-43
Identities = 108/115 (93%)
Strand = Plus / Minus
Query: 166 ttgaaacaacgcaaagtcatgaaagagatgtttgttagcgtaatgatgatctaccgtgct 225
||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 495 ttgaatcaacgcaaagtcatgaaagagatgtttgataatgcaatgatgatctaccgtgct 436
Query: 226 aattgcaatgtcaagaggattacatggtcaaaagccaaatggaatactataaagt 280
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 435 aattgcaatgacaagaggattacatggtccaaagccaaatggaatactataaagt 381
>gnl|LJGI|TC81287
Length = 1368
Score = 167 bits (84), Expect = 5e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 196 tttgttagcgtaatgatgatctaccgtgctaattgcaatgtcaagaggattacatggtca 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tttgttagcgtaatgatgatctaccgtgctaattgcaatgtcaagaggattacatggtca 699
Query: 256 aaagccaaatggaatactataaag 279
||||||||||||||||||||||||
Sbjct: 700 aaagccaaatggaatactataaag 723
Score = 121 bits (61), Expect = 3e-27
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 143 aggagatcgacattgggtgttggttgaaacaacgcaaagtcatgaaagagatgtttgtta 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggagatcgacattgggtgttggttgaaacaacgcaaagtcatgaaagagatgtttgtta 564
Query: 203 g 203
|
Sbjct: 565 g 565
>gnl|LJGI|TC58099 weakly similar to UniRef100_A4IG17 Cluster: LOC563938 protein; n=1;
Danio rerio|Rep: LOC563938 protein - Danio rerio
(Zebrafish) (Brachydanio rerio), partial (4%)
Length = 960
Score = 125 bits (63), Expect = 2e-28
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 202 agcgtaatgatgatctaccgtgctaattgcaatgtcaagaggattacatggtcaaaagcc 261
|||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 355 agcgcaatgatgatctaccgtgctaattgcaatgacaagaggattacatggtccaaagcc 414
Query: 262 aaatggaatactataaagt 280
||||||||||| |||||||
Sbjct: 415 aaatggaatacgataaagt 433
>gnl|LJGI|TC77884
Length = 548
Score = 113 bits (57), Expect = 6e-25
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 80 gctgggttggtgtaatggaagcgctcccttattgtcccaagcttcaaactcttgccattg 139
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gctgggttggtgtaatggaagtgctcccttattgtcccaagcttcaaactcttgacattg 60
Query: 140 aaaag 144
|||||
Sbjct: 61 aaaag 65
>gnl|LJGI|TC73313
Length = 602
Score = 91.7 bits (46), Expect = 2e-18
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 196 tttgttagcgtaatgatgatctaccgtgctaattgcaatgtcaagaggattacatggtca 255
|||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 51 tttgttagcgccatgatgatctaccgtgctaattgcaatgaccagaggattacatggtcc 110
Query: 256 aaag-ccaaatggaatactataaagt 280
||| || |||||||||| |||||||
Sbjct: 111 caagccccaatggaatacgataaagt 136