Miyakogusa Predicted Gene

Lj0g3v0017249.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0017249.1 tr|G7K8U7|G7K8U7_MEDTR Nodulation signaling
pathway OS=Medicago truncatula GN=MTR_5g058860 PE=4
SV=1,68.45,0,seg,NULL; GRAS,Transcription factor GRAS; FAMILY NOT
NAMED,NULL,CUFF.953.1
         (1480 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57150 UniRef100_Q2PEG7 Cluster: Transcription initiat...   151   1e-35
gnl|LJGI|TC71301 homologue to UniRef100_A5HVE5 Cluster: DELLA pr...    60   4e-08

>gnl|LJGI|TC57150 UniRef100_Q2PEG7 Cluster: Transcription initiator for nodulation;
           n=2; Lotus japonicus|Rep: Transcription initiator for
           nodulation - Lotus japonicus, complete
          Length = 1500

 Score =  151 bits (76), Expect = 1e-35
 Identities = 160/188 (85%)
 Strand = Plus / Plus

                                                                       
Query: 304 gtgcacctcctgatggcggcggcggaggctctcaccggtgctaacaagagccacgacctg 363
           |||||||| |||||||| |  |||||||| |||||||| || ||||||| || ||| |||
Sbjct: 346 gtgcacctgctgatggccggcgcggaggccctcaccggcgcaaacaagaaccgcgaactg 405

                                                                       
Query: 364 gctcgagcgatattgattcggctcaaggagttggtgtcccacaccgccaacaccaacatg 423
           ||||||| ||||||| |||||||||||||||||||||||||||||| |   || ||||||
Sbjct: 406 gctcgagtgatattggttcggctcaaggagttggtgtcccacaccgacggtacaaacatg 465

                                                                       
Query: 424 gagagactcgcggcgtattttaccgacgcgctacagggtctgctagatggcgccgcgggt 483
           ||||| || || |||||||||||||| ||||| || || |||||||| ||||||| ||| 
Sbjct: 466 gagaggcttgctgcgtattttaccgaagcgctgcaaggcctgctagaaggcgccggggga 525

                   
Query: 484 gcgcacaa 491
           ||| ||||
Sbjct: 526 gcgtacaa 533



 Score =  103 bits (52), Expect = 3e-21
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                       
Query: 568 cttcaagacatgtcaccttacatcaagttcgctcacttcacagccaaccaggccatcctt 627
           |||||||||||||| |||||| |||||||||  |||||||| ||||||||||||||  | 
Sbjct: 610 cttcaagacatgtccccttacgtcaagttcggccacttcacggccaaccaggccattgtc 669

                                           
Query: 628 gaggctgtggcccacgaacgcagggtccacat 659
           ||||| ||||||||||||||| ||||||||||
Sbjct: 670 gaggccgtggcccacgaacgccgggtccacat 701



 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1366 aatgatgggtatagggtggaggaattaagtaacaataagttggtgttgagttggaaatca 1425
            ||||| ||||| |||||||||||  |  |||  |||||||||||||||  ||||||| | 
Sbjct: 1384 aatgacgggtacagggtggaggagctgggtagtaataagttggtgttgcattggaaaacc 1443

                                           
Query: 1426 aggcgtttgctttcggcatctgtttggactt 1456
            |||||||||||||| |||||  |||||||||
Sbjct: 1444 aggcgtttgctttctgcatccctttggactt 1474


>gnl|LJGI|TC71301 homologue to UniRef100_A5HVE5 Cluster: DELLA protein; n=1;
           Phaseolus vulgaris|Rep: DELLA protein - Phaseolus
           vulgaris (Kidney bean) (French bean), partial (32%)
          Length = 590

 Score = 60.0 bits (30), Expect = 4e-08
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 592 aagttcgctcacttcacagccaaccaggccatccttgaggct 633
           |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 209 aagttcgcacacttcaccgccaaccaggccattcttgaggct 250