Miyakogusa Predicted Gene

Lj0g3v0016479.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0016479.1 Non Chatacterized Hit- tr|I1J515|I1J515_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58305
PE,62.5,1.1,seg,NULL,gene.g1419.t1.1
         (207 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81725 similar to UniRef100_A7R536 Cluster: Chromosome...   351   1e-96
gnl|LJGI|TC67895 similar to UniRef100_Q7Y1U0 Cluster: Kinesin-li...    52   1e-06

>gnl|LJGI|TC81725 similar to UniRef100_A7R536 Cluster: Chromosome undetermined
           scaffold_848, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_848,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (49%)
          Length = 870

 Score =  351 bits (177), Expect = 1e-96
 Identities = 177/177 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatccttgtcaaactctaagaaagatttcgaatttgaccgggtttatggacctcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atgaatccttgtcaaactctaagaaagatttcgaatttgaccgggtttatggacctcatg 189

                                                                       
Query: 61  ttggacaagctgagttattcactgatgttcaaccactggtgcagtcagctttggacggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttggacaagctgagttattcactgatgttcaaccactggtgcagtcagctttggacggat 249

                                                                    
Query: 121 ataatgtttccatatttgcttatggacaaacccattccggaaagacacacactatgg 177
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ataatgtttccatatttgcttatggacaaacccattccggaaagacacacactatgg 306


>gnl|LJGI|TC67895 similar to UniRef100_Q7Y1U0 Cluster: Kinesin-like calmodulin
           binding protein; n=1; Gossypium hirsutum|Rep:
           Kinesin-like calmodulin binding protein - Gossypium
           hirsutum (Upland cotton) (Gossypium mexicanum), partial
           (11%)
          Length = 599

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 114 gacggatataatgtttccatatttgcttatggacaaac 151
           ||||| |||||||||| ||||||||||||||| |||||
Sbjct: 101 gacggctataatgtttgcatatttgcttatggtcaaac 138