Miyakogusa Predicted Gene

Lj0g3v0015749.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0015749.1 tr|F2D9U8|F2D9U8_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,46.77,3e-18,NOVEL PROTEIN
(FRAGMENT),NULL; TETRATRICOPEPTIDE REPEAT PROTEIN, TPR,NULL; no
description,Tetratrico,NODE_66141_length_1656_cov_7.674517.path1.1
         (1299 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74161 weakly similar to UniRef100_A7NYI9 Cluster: Chr...   466   e-130
gnl|LJGI|BW600174 similar to UniRef100_A1WK73 Cluster: Response ...   105   7e-22
gnl|LJGI|GO011742 weakly similar to UniRef100_A7Q3D8 Cluster: Ch...   100   4e-20

>gnl|LJGI|TC74161 weakly similar to UniRef100_A7NYI9 Cluster: Chromosome chr6
            scaffold_3, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 492

 Score =  466 bits (235), Expect = e-130
 Identities = 242/243 (99%), Gaps = 1/243 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1058 agtacttcaagagatctgtgctggaggagccgccagatgctgaggcattcagtcgatatg 1117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    agtacttcaagagatctgtgctggaggagccgccagatgctgaggcattcagtcgatatg 64

                                                                        
Query: 1118 ctgatttcctgtggttggtaagaaaggatcttgaggcagcagaacttagataccaggaag 1177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   ctgatttcctgtggttggtaagaaaggatcttgaggcagcagaacttagataccaggaag 124

                                                                        
Query: 1178 cattggaagaagaacccagaaacacttattacgcatcgaagtatgctaatttcctttgga 1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125  cattggaagaagaacccagaaacacttattacgcatcgaagtatgctaatttcctttgga 184

                                                                        
Query: 1238 gcactggtggaaaagatacttgttttccacttgaatcccctgat-aactttccaccataa 1296
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 185  gcactggtggaaaagatacttgttttccacttgaatcccctgataaactttccaccataa 244

               
Query: 1297 aat 1299
            |||
Sbjct: 245  aat 247


>gnl|LJGI|BW600174 similar to UniRef100_A1WK73 Cluster: Response regulator receiver
            protein; n=1; Verminephrobacter eiseniae EF01-2|Rep:
            Response regulator receiver protein - Verminephrobacter
            eiseniae (strain EF01-2), partial (5%)
          Length = 445

 Score =  105 bits (53), Expect = 7e-22
 Identities = 128/145 (88%), Gaps = 6/145 (4%)
 Strand = Plus / Plus

                                                                        
Query: 1160 aacttagataccaggaagcattgg-aagaagaacccagaaacacttattacgcat-cgaa 1217
            ||||| |||||||||||||||||| || ||||||||| |||||||| |||||||| | ||
Sbjct: 99   aactttgataccaggaagcattggtaataagaacccataaacacttcttacgcatgctaa 158

                                                                        
Query: 1218 gtatgctaatttcctttggagcact-ggtggaaaagatacttgt-tttccacttgaatcc 1275
            || ||| |||||| | |||| |||| || |||||| |||||||| |||||||||||||||
Sbjct: 159  gt-tgcgaatttcatgtggatcactcggaggaaaatatacttgtgtttccacttgaatcc 217

                                     
Query: 1276 cctgat-aactttccaccataaaat 1299
            |||||| ||||||||||||||||||
Sbjct: 218  cctgataaactttccaccataaaat 242


>gnl|LJGI|GO011742 weakly similar to UniRef100_A7Q3D8 Cluster: Chromosome chr13
            scaffold_48, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (24%)
          Length = 621

 Score = 99.6 bits (50), Expect = 4e-20
 Identities = 130/154 (84%), Gaps = 2/154 (1%)
 Strand = Plus / Plus

                                                                        
Query: 911  agcttgaaggggatcagtatgaggaatatgtcaaaaca-aggctttattacagaaagcat 969
            |||||||||||||||| |||||||||||| |||||||  |||||| |||||  ||| | |
Sbjct: 469  agcttgaaggggatcaatatgaggaatatctcaaaactgaggctt-attaccaaaaactt 527

                                                                        
Query: 970  ttacgccaggcaccttacaattctcttctgctgtctaactatgcacagttcctttatctt 1029
             ||| |  | ||||| ||||||| |||||||||||||||||||| |||||||| |  || 
Sbjct: 528  atactcttgacacctcacaattcacttctgctgtctaactatgctcagttcctcttccta 587

                                              
Query: 1030 gtcgttcatgaccttgatggggcagaagagtact 1063
            ||  |||||||| |||||||||||||||||||||
Sbjct: 588  gttcttcatgacattgatggggcagaagagtact 621