Miyakogusa Predicted Gene
- Lj0g3v0015709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0015709.1 CUFF.840.1
(641 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72417 similar to UniRef100_A7NWY8 Cluster: Chromosome... 1080 0.0
gnl|LJGI|TC72322 similar to UniRef100_A7NWY8 Cluster: Chromosome... 258 4e-68
gnl|LJGI|TC73202 weakly similar to UniRef100_A7NWY8 Cluster: Chr... 113 1e-24
gnl|LJGI|TC68358 similar to UniRef100_Q8LK24 Cluster: SOS2-like ... 82 5e-15
>gnl|LJGI|TC72417 similar to UniRef100_A7NWY8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 783
Score = 1080 bits (545), Expect = 0.0
Identities = 545/545 (100%)
Strand = Plus / Plus
Query: 1 atggagccgcggatcgtgcgagaaattgacgccatgcgacgcctccagcaccacccgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atggagccgcggatcgtgcgagaaattgacgccatgcgacgcctccagcaccacccgaac 298
Query: 61 atcctcaaaatccacgaggtcatggccaccaggaccaagatctacctcatcgtcgactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atcctcaaaatccacgaggtcatggccaccaggaccaagatctacctcatcgtcgactac 358
Query: 121 gccggcggaggagagctcttctccaagatctcccgccgaggccgcctcccggagcccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gccggcggaggagagctcttctccaagatctcccgccgaggccgcctcccggagcccctc 418
Query: 181 gcccgccgctacttccagcagctcgtctccgccctctgtttctgccaccgaaacggcgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcccgccgctacttccagcagctcgtctccgccctctgtttctgccaccgaaacggcgtc 478
Query: 241 gcgcaccgcgacctcaagccgcagaacctcctcctggacgccgagggaaacctcaaggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gcgcaccgcgacctcaagccgcagaacctcctcctggacgccgagggaaacctcaaggtc 538
Query: 301 tctgacttcggcctctccgcgctgccggagcagctcagcaacggcctgctccagactgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tctgacttcggcctctccgcgctgccggagcagctcagcaacggcctgctccagactgcc 598
Query: 361 tgcggaactccggcgtacaccgcgccggagatcctccgtcatgtcaggtacgatgggtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgcggaactccggcgtacaccgcgccggagatcctccgtcatgtcaggtacgatgggtcc 658
Query: 421 gtggccgacgcctggtcctgcggggtcatcctgtacgtcttactcgccggctacctcccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gtggccgacgcctggtcctgcggggtcatcctgtacgtcttactcgccggctacctcccg 718
Query: 481 tttgacgactccaacctcgcggcgatgtgcaagaggatcagccgccgcgattaccagttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tttgacgactccaacctcgcggcgatgtgcaagaggatcagccgccgcgattaccagttc 778
Query: 541 ccggc 545
|||||
Sbjct: 779 ccggc 783
>gnl|LJGI|TC72322 similar to UniRef100_A7NWY8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 758
Score = 258 bits (130), Expect = 4e-68
Identities = 396/484 (81%), Gaps = 3/484 (0%)
Strand = Plus / Plus
Query: 28 gacgccatgcgacgcctccagcaccacccgaacatcctcaaaatccacgaggtcatggcc 87
||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||
Sbjct: 269 gacgccatgcgccgcctccaccaccaccccaacatcctccgcatccacgaggtcatggcg 328
Query: 88 accaggaccaagatctacctcatcgtcgactacgccggcggaggagagctcttctccaag 147
|| | ||||||||| ||||| |||| || | ||||| || || || |||||||||
Sbjct: 329 acgaaaaccaagatccacctcgtcgttgagttcgccgctggcggcgaactcttctccgcc 388
Query: 148 atctcccgccgaggccgcctcccggagcccctcgcccgccgctacttccagcagctcgtc 207
||||||||||| || ||||||||| || |||||||||||||||||||| |||
Sbjct: 389 atctcccgccgtgggaagctcccggagaatacagctcgccgctacttccagcagctggtc 448
Query: 208 tccgccctctgtttctgccaccgaaacggcgtcgcgcaccgcgacctcaagccgcagaac 267
||||| ||| | ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 449 tccgctctccgattctgccaccgtaacggcgtcgcccaccgcgacctcaagccgcagaat 508
Query: 268 ctcctcctggacgccgagggaaacctcaaggtctctgacttcggcctctccgcgctgccg 327
|||||||| ||||||| || |||||||||||||| |||||||| |||||||| |||||
Sbjct: 509 ctcctcctcgacgccgctggtaacctcaaggtctccgacttcggactctccgccttgccg 568
Query: 328 gagcagctcagcaacggcctgctccagactgcctgcggaactccggcgtacaccgcgccg 387
||||| ||| ||||| || || || || || ||||| |||||||||||||||||||||
Sbjct: 569 gagcatctccagaacgggctcctacacaccgcttgcggtactccggcgtacaccgcgccg 628
Query: 388 gagatcctccgtc---atgtcaggtacgatgggtccgtggccgacgcctggtcctgcggg 444
||||| ||||||| | | | |||||||| ||| |||||| || |||||||||||
Sbjct: 629 gagattctccgtctcagcggcggatacgatggctccaaggccgatgcatggtcctgcggc 688
Query: 445 gtcatcctgtacgtcttactcgccggctacctcccgtttgacgactccaacctcgcggcg 504
|| |||| | |||| | |||||||| ||||| || || ||||| |||||| ||||||||
Sbjct: 689 ctcgtcctcttcgtcctcctcgccgggtaccttcccttcgacgattccaacatcgcggcg 748
Query: 505 atgt 508
||||
Sbjct: 749 atgt 752
>gnl|LJGI|TC73202 weakly similar to UniRef100_A7NWY8 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 812
Score = 113 bits (57), Expect = 1e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 585 cctggacccgaacccgaagaccagaatgcggttggagagggtgttggagaacgcgtg 641
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggacccgaacccgaagaccagaatgcggttggagagggtgttggagaacgcgtg 57
>gnl|LJGI|TC68358 similar to UniRef100_Q8LK24 Cluster: SOS2-like protein kinase; n=1;
Glycine max|Rep: SOS2-like protein kinase - Glycine max
(Soybean), partial (56%)
Length = 964
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 244 caccgcgacctcaagccgcagaacctcctcctggacgccgagggaaacctcaaggtctct 303
|||||||||||||||||| |||| |||||||| || | || || |||||||||||||||
Sbjct: 597 caccgcgacctcaagccggagaatctcctcctcgatgaagacggtaacctcaaggtctct 656
Query: 304 gacttcggcctct 316
|||||||||||||
Sbjct: 657 gacttcggcctct 669