Miyakogusa Predicted Gene
- Lj0g3v0014579.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0014579.1 Non Chatacterized Hit- tr|I1JGH6|I1JGH6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,66.59,0,RING/U-box,NULL; ARM repeat,Armadillo-type fold; Modified
RING finger domain,U box domain; U-box,U b,CUFF.783.1
(1272 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58406 similar to UniRef100_A7QHS6 Cluster: Chromosome... 1437 0.0
gnl|LJGI|TC69803 weakly similar to UniRef100_A7PGE4 Cluster: Chr... 1154 0.0
gnl|LJGI|TC59370 similar to UniRef100_Q3HLY8 Cluster: U-box prot... 52 9e-06
>gnl|LJGI|TC58406 similar to UniRef100_A7QHS6 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 863
Score = 1437 bits (725), Expect = 0.0
Identities = 725/725 (100%)
Strand = Plus / Plus
Query: 1 atggacaatgaagttgaagttcctcagtatttcatctgccccatatcgctgcaaatcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atggacaatgaagttgaagttcctcagtatttcatctgccccatatcgctgcaaatcatg 198
Query: 61 aaagaccctgtaactgccataactggaatcacatacgaccgagacagcatcgagcagtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaagaccctgtaactgccataactggaatcacatacgaccgagacagcatcgagcagtgg 258
Query: 121 ctaatctccaacaagaaccaccaccacgcgacgtgccccgtcacaaagcagcctctccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctaatctccaacaagaaccaccaccacgcgacgtgccccgtcacaaagcagcctctccca 318
Query: 181 agagactttgatttaacgccgaatcacacgctccgccgcttgatccaaggttggtgcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agagactttgatttaacgccgaatcacacgctccgccgcttgatccaaggttggtgcacc 378
Query: 241 ctaaacgccgccctcggcattgatcggattccaaccccgaagtcaccgcttaataagacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctaaacgccgccctcggcattgatcggattccaaccccgaagtcaccgcttaataagacc 438
Query: 301 caagtcctcaagcttctcaaagacctcaaggatgaacgggaacccagagacccaaatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caagtcctcaagcttctcaaagacctcaaggatgaacgggaacccagagacccaaatctt 498
Query: 361 caacacaaaactctcatgcaactggagctcctcgcagcacagagcgagaggaacagaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caacacaaaactctcatgcaactggagctcctcgcagcacagagcgagaggaacagaaag 558
Query: 421 tgtttagtagaatctggtgtgccaaaggctgtgctcatgttcatagtgtcttgtttcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtttagtagaatctggtgtgccaaaggctgtgctcatgttcatagtgtcttgtttcaga 618
Query: 481 aaaggccaaatcaaagagggtcttgaagaagctctgagtttattgcagtttgttaaggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaaggccaaatcaaagagggtcttgaagaagctctgagtttattgcagtttgttaaggtc 678
Query: 541 cccacagaggaggctatgctgattttatcagaagatgatcatcaaatattggattctcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cccacagaggaggctatgctgattttatcagaagatgatcatcaaatattggattctcta 738
Query: 601 acatgggttttagctttaccttctgatcaaataagaaactcaattgcagtgaaatcacat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 acatgggttttagctttaccttctgatcaaataagaaactcaattgcagtgaaatcacat 798
Query: 661 gcagttttagctctcaaaaaactagtccacaagggtggtcctggtgttcttgaaaggtta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gcagttttagctctcaaaaaactagtccacaagggtggtcctggtgttcttgaaaggtta 858
Query: 721 aactt 725
|||||
Sbjct: 859 aactt 863
>gnl|LJGI|TC69803 weakly similar to UniRef100_A7PGE4 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 732
Score = 1154 bits (582), Expect = 0.0
Identities = 582/582 (100%)
Strand = Plus / Plus
Query: 691 aagggtggtcctggtgttcttgaaaggttaaacttagaattctttgaaaggattgtgaag 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagggtggtcctggtgttcttgaaaggttaaacttagaattctttgaaaggattgtgaag 60
Query: 751 attttgcgaaatggcgctataactcaacaaggaacccgtgcttctcttcaagtcatgtta 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attttgcgaaatggcgctataactcaacaaggaacccgtgcttctcttcaagtcatgtta 120
Query: 811 agcgcttgtccttggggaagaaacaggttcatgatggtggaagccggtgcagttttcaat 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcgcttgtccttggggaagaaacaggttcatgatggtggaagccggtgcagttttcaat 180
Query: 871 ctcatagagatcgaattaactgcaccggaaaagaaaattacagagcttgtagtaactata 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcatagagatcgaattaactgcaccggaaaagaaaattacagagcttgtagtaactata 240
Query: 931 ctttttcatttgtgcacttgtgcggatgggagggctcagtttctgagccacgaagggtct 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctttttcatttgtgcacttgtgcggatgggagggctcagtttctgagccacgaagggtct 300
Query: 991 attgcggtggtgacagagagattgttgaaggtttccgctgcggtggatgataaagttatg 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgcggtggtgacagagagattgttgaaggtttccgctgcggtggatgataaagttatg 360
Query: 1051 tttgttttggcgttagtgtcgcaattctccgcgacgaacggggtgttgcaggagatgtta 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttgttttggcgttagtgtcgcaattctccgcgacgaacggggtgttgcaggagatgtta 420
Query: 1111 agggttgggacagtgtccaagcttttcatgttgcttcagggtgatcatgctaagtatttg 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agggttgggacagtgtccaagcttttcatgttgcttcagggtgatcatgctaagtatttg 480
Query: 1171 aaagataaagcgatggagataatcagggcccactcgaaggtttggaagaattctccttgc 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagataaagcgatggagataatcagggcccactcgaaggtttggaagaattctccttgc 540
Query: 1231 tttcctgatccctcttcttatgcaagcttgaatgtatagatc 1272
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttcctgatccctcttcttatgcaagcttgaatgtatagatc 582
>gnl|LJGI|TC59370 similar to UniRef100_Q3HLY8 Cluster: U-box protein; n=1; Capsicum
annuum|Rep: U-box protein - Capsicum annuum (Bell
pepper), partial (37%)
Length = 764
Score = 52.0 bits (26), Expect = 9e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 85 ggaatcacatacgaccgagacagcatcgag 114
|||||||| |||||||||||||||||||||
Sbjct: 162 ggaatcacctacgaccgagacagcatcgag 191