Miyakogusa Predicted Gene

Lj0g3v0014299.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0014299.1 Non Chatacterized Hit- tr|I1LYM1|I1LYM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7632
PE=,78.7,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase,
C-termina,NODE_1768_length_4244_cov_23.186146.path1.1
         (3717 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64434 similar to UniRef100_A7Q1R2 Cluster: Chromosome...   803   0.0  
gnl|LJGI|DC600057 similar to UniRef100_A7Q1R2 Cluster: Chromosom...   291   2e-77
gnl|LJGI|BP042055 similar to UniRef100_A7Q1R2 Cluster: Chromosom...   200   4e-50

>gnl|LJGI|TC64434 similar to UniRef100_A7Q1R2 Cluster: Chromosome chr7 scaffold_44,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_44, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 706

 Score =  803 bits (405), Expect = 0.0
 Identities = 408/409 (99%)
 Strand = Plus / Plus

                                                                        
Query: 3309 caacaaattcaatggatttgctgctggggcatcttctggtaaagcattatcttctgctga 3368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    caacaaattcaatggatttgctgctggggcatcttctggtaaagcattatcttctgctga 61

                                                                        
Query: 3369 actgttgtctaaaattcgaggtaaccaagaaaaagcaatcggtgctgggcttgaacatca 3428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   actgttgtctaaaattcgaggtaaccaagaaaaagcaatcggtgctgggcttgaacatca 121

                                                                        
Query: 3429 gcttggtacgtccagtaccactaatcaagcaagatctacagatgttagatcttctagggc 3488
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 122  gcttggtacgtccagtaccactaatcaagctagatctacagatgttagatcttctagggc 181

                                                                        
Query: 3489 tgctgaaaattcatctggatcgcaacctgaagtattgattcgtcaaatatgtacttttct 3548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  tgctgaaaattcatctggatcgcaacctgaagtattgattcgtcaaatatgtacttttct 241

                                                                        
Query: 3549 acaacagcaaggtggtagttccagttcagccagcatagtacagcatttcaaggaccgtgt 3608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  acaacagcaaggtggtagttccagttcagccagcatagtacagcatttcaaggaccgtgt 301

                                                                        
Query: 3609 ttcctcaagagaacttgccctattcaagaatatgttaaaggaaatagcaattttgcagaa 3668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  ttcctcaagagaacttgccctattcaagaatatgttaaaggaaatagcaattttgcagaa 361

                                                             
Query: 3669 aggatcaaatggttcccattgggttctgaagccagagtatcaataacag 3717
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  aggatcaaatggttcccattgggttctgaagccagagtatcaataacag 410


>gnl|LJGI|DC600057 similar to UniRef100_A7Q1R2 Cluster: Chromosome chr7 scaffold_44
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
           partial (2%)
          Length = 160

 Score =  291 bits (147), Expect = 2e-77
 Identities = 156/160 (97%)
 Strand = Plus / Plus

                                                                       
Query: 25  ttgctctccagtttgggcgtgaagtctgccaatcccgaagacatcgaacgccatgttttg 84
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttgctctccagtttgggcgtgaagtctgccaatcccgaagacatcgaacgccatgttttg 60

                                                                       
Query: 85  gaaaaggctaggaatgatgctgcagtgactgttactactgaaggtgaagggagcaacacc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaaaaggctaggaatgatgctgcagtgactgttactactgaaggtgaagggagcaacacc 120

                                                   
Query: 145 aaggaagaagagtcttctcattcacgggaacctcttgatc 184
           ||||||| ||   |||||||||||||||||||||||||||
Sbjct: 121 aaggaaggagnnncttctcattcacgggaacctcttgatc 160


>gnl|LJGI|BP042055 similar to UniRef100_A7Q1R2 Cluster: Chromosome chr7 scaffold_44,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_44, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (3%)
          Length = 440

 Score =  200 bits (101), Expect = 4e-50
 Identities = 101/101 (100%)
 Strand = Plus / Minus

                                                                        
Query: 3617 gagaacttgccctattcaagaatatgttaaaggaaatagcaattttgcagaaaggatcaa 3676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440  gagaacttgccctattcaagaatatgttaaaggaaatagcaattttgcagaaaggatcaa 381

                                                     
Query: 3677 atggttcccattgggttctgaagccagagtatcaataacag 3717
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 380  atggttcccattgggttctgaagccagagtatcaataacag 340