Miyakogusa Predicted Gene
- Lj0g3v0012219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0012219.1 Non Chatacterized Hit- tr|I1MYS1|I1MYS1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56469
PE,71.69,0,NUCLEOLAR PROTEIN-RELATED,NULL; NUCLEOLAR PROTEIN
7/ESTROGEN RECEPTOR COACTIVATOR-RELATED,NULL;
doma,NODE_54831_length_1456_cov_62.771290.path1.1
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60232 similar to UniRef100_A7R5H9 Cluster: Chromosome... 2212 0.0
gnl|LJGI|TC70737 similar to UniRef100_A7R5H9 Cluster: Chromosome... 206 2e-52
gnl|LJGI|TC66851 similar to UniRef100_A7R5H9 Cluster: Chromosome... 84 2e-15
gnl|LJGI|TC59785 similar to UniRef100_A7R5H9 Cluster: Chromosome... 84 2e-15
>gnl|LJGI|TC60232 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(60%)
Length = 1527
Score = 2212 bits (1116), Expect = 0.0
Identities = 1116/1116 (100%)
Strand = Plus / Plus
Query: 1 atgggaaagaagccatctctgcgcaccaaagcaaccgactttgtttatgccgttctcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atgggaaagaagccatctctgcgcaccaaagcaaccgactttgtttatgccgttctcaac 146
Query: 61 cccatctctgattctaatgatcacaatcacaaaccttccaaacaccctccatcaccttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cccatctctgattctaatgatcacaatcacaaaccttccaaacaccctccatcaccttcc 206
Query: 121 gaagaagtaggtgaaacagaaataagtgcatcagagacttctgatgaagagggtagccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaagaagtaggtgaaacagaaataagtgcatcagagacttctgatgaagagggtagccat 266
Query: 181 ggtttagatggtggacctgatacttcatccttcactgctttcctctattcttttgtgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggtttagatggtggacctgatacttcatccttcactgctttcctctattcttttgtgtca 326
Query: 241 tcctcagacactaaaacagacaaacatgggcagaatgatgagaaaagtgaacctgataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcctcagacactaaaacagacaaacatgggcagaatgatgagaaaagtgaacctgataat 386
Query: 301 attaaccctttaccagactcttccttgaaagaaaatggtcgaaggaaaagtttgttttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 attaaccctttaccagactcttccttgaaagaaaatggtcgaaggaaaagtttgttttct 446
Query: 361 agaggtaagcaatcacttggtagagcgattcgccacgctacgagaatcggtggatttcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agaggtaagcaatcacttggtagagcgattcgccacgctacgagaatcggtggatttcgc 506
Query: 421 caccatgaccgtcgcaaagataatgtagaaatgaaatatgatgatgggcattgttctaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caccatgaccgtcgcaaagataatgtagaaatgaaatatgatgatgggcattgttctaaa 566
Query: 481 atttctactgttgagcctgtgaaagagtcagtgcacaggcctttggttgatctgccagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atttctactgttgagcctgtgaaagagtcagtgcacaggcctttggttgatctgccagaa 626
Query: 541 atttctgaaccttcggttctcctctctgagggtatgagaagtgttctctatgcttctctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 atttctgaaccttcggttctcctctctgagggtatgagaagtgttctctatgcttctctt 686
Query: 601 ccacctcttgtgcatggaaggaaatggctgctgctatacagcacttggaggcatggtgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ccacctcttgtgcatggaaggaaatggctgctgctatacagcacttggaggcatggtgtg 746
Query: 661 actctttcaactctttacagaagaagcatgctttcacctggatcgtgtttgctggttgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 actctttcaactctttacagaagaagcatgctttcacctggatcgtgtttgctggttgtt 806
Query: 721 ggagaccaaagaggagcagtgtttggtagcttggttgaagcacctatgagaccatccaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ggagaccaaagaggagcagtgtttggtagcttggttgaagcacctatgagaccatccaat 866
Query: 781 aggagaaaataccagggaacaaacaatacatatgttttcacaaacatctctggtcatcct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 aggagaaaataccagggaacaaacaatacatatgttttcacaaacatctctggtcatcct 926
Query: 841 gttatatatcgcccaacaggggttaaccgctatttcacgctttgcaacactgactacata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 gttatatatcgcccaacaggggttaaccgctatttcacgctttgcaacactgactacata 986
Query: 901 gcaattggtgggggaggtcattttgcgctttatttggatggagatctattgaatggctca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 gcaattggtgggggaggtcattttgcgctttatttggatggagatctattgaatggctca 1046
Query: 961 agttcagtctctgaaacttatgggaatccttgccttgcaaattctcaggaatttgaagtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 agttcagtctctgaaacttatgggaatccttgccttgcaaattctcaggaatttgaagtg 1106
Query: 1021 aaggaagtagagttgtggggctttgtacaaacttcaaaatatgaggaagtactcgcattg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 aaggaagtagagttgtggggctttgtacaaacttcaaaatatgaggaagtactcgcattg 1166
Query: 1081 agcagaacagagacacctgggatctgtcgatggtaa 1116
||||||||||||||||||||||||||||||||||||
Sbjct: 1167 agcagaacagagacacctgggatctgtcgatggtaa 1202
>gnl|LJGI|TC70737 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(21%)
Length = 568
Score = 206 bits (104), Expect = 2e-52
Identities = 197/228 (86%)
Strand = Plus / Plus
Query: 865 aaccgctatttcacgctttgcaacactgactacatagcaattggtgggggaggtcatttt 924
|||||||| ||||| ||||||| | |||| |||||| || |||||||| ||||||||
Sbjct: 10 aaccgctacttcacactttgcacgtccgacttcatagcgataggtgggggtagtcatttt 69
Query: 925 gcgctttatttggatggagatctattgaatggctcaagttcagtctctgaaacttatggg 984
|| |||||||||||||| || ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 70 gcactttatttggatggtgacctattgaatggatcaagttcagtctcagaaacgtatggg 129
Query: 985 aatccttgccttgcaaattctcaggaatttgaagtgaaggaagtagagttgtggggcttt 1044
||||||||||||||| | ||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 130 aatccttgccttgcacactctcaagagtttgaagtgaaggaagtagagttatggggcttt 189
Query: 1045 gtacaaacttcaaaatatgaggaagtactcgcattgagcagaacagag 1092
||| | ||||||| ||||||||| || | ||||| ||||||| ||||
Sbjct: 190 gtatatccttcaaagtatgaggaaataatggcattaagcagaaaagag 237
>gnl|LJGI|TC66851 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 839
Score = 83.8 bits (42), Expect = 2e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 168 agagggtagccatggtttagatggtggacctgatacttcatccttcactgctttcctcta 227
||||||| ||||| ||||| || ||| ||||||||||||||||||||||| ||||||||
Sbjct: 486 agagggtgcccatgatttagttgatgggcctgatacttcatccttcactgcattcctcta 545
Query: 228 ttcttttgtgtcatcctc 245
||||||| |||| |||||
Sbjct: 546 ttcttttttgtcttcctc 563
>gnl|LJGI|TC59785 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 943
Score = 83.8 bits (42), Expect = 2e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 168 agagggtagccatggtttagatggtggacctgatacttcatccttcactgctttcctcta 227
||||||| ||||| ||||| || ||| ||||||||||||||||||||||| ||||||||
Sbjct: 382 agagggtgcccatgatttagttgatgggcctgatacttcatccttcactgcattcctcta 441
Query: 228 ttcttttgtgtcatcctc 245
||||||| |||| |||||
Sbjct: 442 ttcttttttgtcttcctc 459
Score = 73.8 bits (37), Expect = 2e-12
Identities = 110/133 (82%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 613 catggaaggaaatggctgctgctatacagcacttggaggcatggtgtgactctttcaact 672
||||| ||||||||||| |||||||||| ||||||| ||||||| | | ||| |||||
Sbjct: 812 catgggaggaaatggctaatgctatacagtacttggaagcatggtatatcacttgcaact 871
Query: 673 ctttacagaagaagcatgctttcacctggatcgtgtttgctggttgttggagaccaaaga 732
|||||| | ||||||||| ||| ||| || | ||||||||||||||||||||| | |
Sbjct: 872 ctttaccggagaagcatggtttggcct-gactgagtttgctggttgttggagaccgtaaa 930
Query: 733 ggagcagtgtttg 745
|||||||| ||||
Sbjct: 931 ggagcagtatttg 943