Miyakogusa Predicted Gene

Lj0g3v0012039.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0012039.1 tr|B9H4T7|B9H4T7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_558531 PE=4 SV=1,41.67,0.00001,
,CUFF.611.1
         (531 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81609 weakly similar to UniRef100_A7R6W4 Cluster: Chr...  1037   0.0  

>gnl|LJGI|TC81609 weakly similar to UniRef100_A7R6W4 Cluster: Chromosome undetermined
           scaffold_1450, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_1450,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (3%)
          Length = 1123

 Score = 1037 bits (523), Expect = 0.0
 Identities = 529/531 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttgcctgagggagatgaaagtgcaaactgtgctttaccactagctttcttaagcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atgttgcctgagggagatgaaagtgcaaactgtgctttaccactagctttcttaagcatc 433

                                                                       
Query: 61  ttagaggttcctaatcaagccaaaagttcaatgtgtttagatgatcaaataaattgtcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttagaggttcctaatcaagccaaaagttcaatgtgtttagatgatcaaataaattgtcaa 493

                                                                       
Query: 121 aactgcattgatgtacaaatggagagctcagatgtgtattcacagtgcgtgattgatata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aactgcattgatgtacaaatggagagctcagatgtgtattcacagtgcgtgattgatata 553

                                                                       
Query: 181 cctagtgtgaacggaaaccctgtttcacctgaatcctttgaagagggagttgaaagtttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cctagtgtgaacggaaaccctgtttcacctgaatcctttgaagagggagttgaaagtttt 613

                                                                       
Query: 241 aaaaccggcaactcacctactagtgtactgtggagggaatcaagtttaaaagttggtgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaaaccggcaactcacctactagtgtactgtggagggaatcaagtttaaaagttggtgca 673

                                                                       
Query: 301 aaacttatgcagagtttgtcgaacctcagcaatcaaagagaaccgagtaaattaacagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aaacttatgcagagtttgtcgaacctcagcaatcaaagagaaccgagtaaattaacagat 733

                                                                       
Query: 361 aaaccagtcacagagaaggtgcacgatatgccaataaacaaatggagaagatataagcgc 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 734 aaaccagtcacagagaaggtgcacgatatgccaataaacaaatggggaagatataagcgc 793

                                                                       
Query: 421 tctgcctcatttgattcgagaaaagttgctcttctgttttcaatattgtcaagtttggga 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tttgcctcatttgattcgagaaaagttgctcttctgttttcaatattgtcaagtttggga 853

                                                              
Query: 481 acattggtgttgatttatctgacactgagggtccgtgttcatatttaaagg 531
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 acattggtgttgatttatctgacactgagggtccgtgttcatatttaaagg 904