Miyakogusa Predicted Gene
- Lj0g3v0011469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0011469.1 tr|D0FZ14|D0FZ14_SOYBN Cryptochrome1 OS=Glycine
max GN=GmCRY1c1 PE=2 SV=1,89.03,0,Cryptochrome_C,Cryptochrome
C-terminal; FAD_binding_7,DNA photolyase, FAD-binding/Cryptochrome,
C-te,NODE_41817_length_1369_cov_269.544922.path1.1
(930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69438 similar to UniRef100_A2Q6E2 Cluster: Deoxyribod... 961 0.0
gnl|LJGI|TC62533 similar to UniRef100_Q6EAN1 Cluster: Mutant cry... 946 0.0
gnl|LJGI|TC69022 similar to UniRef100_Q6EAN1 Cluster: Mutant cry... 256 2e-67
gnl|LJGI|AV777588 similar to UniRef100_Q309E8 Cluster: Cryptochr... 82 7e-15
>gnl|LJGI|TC69438 similar to UniRef100_A2Q6E2 Cluster: Deoxyribodipyrimidine
photolyase, class 1; n=1; Medicago truncatula|Rep:
Deoxyribodipyrimidine photolyase, class 1 - Medicago
truncatula (Barrel medic), partial (29%)
Length = 972
Score = 961 bits (485), Expect = 0.0
Identities = 485/485 (100%)
Strand = Plus / Plus
Query: 444 ggaggaaagacatgaacctgttaggaacaatccccctcatggtactcgacgctaccagga 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggaggaaagacatgaacctgttaggaacaatccccctcatggtactcgacgctaccagga 434
Query: 504 tcagatggtgccaagcatcacttcttcccatgtgagagtggaagaggaagaaattgcttc 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcagatggtgccaagcatcacttcttcccatgtgagagtggaagaggaagaaattgcttc 494
Query: 564 agatcttcgaaactcagcacaagacaacagagctgaagtgccaatgaatgtaaacacaca 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agatcttcgaaactcagcacaagacaacagagctgaagtgccaatgaatgtaaacacaca 554
Query: 624 gcaaaatgcaagagaggcagtgaaccaaggagtgttgcagactataaatagaaacaacac 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gcaaaatgcaagagaggcagtgaaccaaggagtgttgcagactataaatagaaacaacac 614
Query: 684 tcaactacagcacaataacacagtgtggctgagaaatgcggccgaagattctaccgcaga 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcaactacagcacaataacacagtgtggctgagaaatgcggccgaagattctaccgcaga 674
Query: 744 atcttcaagtagtactaggagagaaagagatgggggtgttgtcccggtgtggtctccccc 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atcttcaagtagtactaggagagaaagagatgggggtgttgtcccggtgtggtctccccc 734
Query: 804 agcttctagtttctcagagcaatttgtagatgatgaaaatggtataggagctagttcatc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agcttctagtttctcagagcaatttgtagatgatgaaaatggtataggagctagttcatc 794
Query: 864 ctacttgcagaggcatcctcagtctcaccaaatgatgaattggactaggctacctcaaac 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ctacttgcagaggcatcctcagtctcaccaaatgatgaattggactaggctacctcaaac 854
Query: 924 tgggt 928
|||||
Sbjct: 855 tgggt 859
>gnl|LJGI|TC62533 similar to UniRef100_Q6EAN1 Cluster: Mutant cryptochrome 1-1
protein; n=1; Pisum sativum|Rep: Mutant cryptochrome 1-1
protein - Pisum sativum (Garden pea), partial (22%)
Length = 934
Score = 946 bits (477), Expect = 0.0
Identities = 480/481 (99%)
Strand = Plus / Plus
Query: 450 aagacatgaacctgttaggaacaatccccctcatggtactcgacgctaccaggatcagat 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagacatgaacctgttaggaacaatccccctcatggtactcgacgctaccaggatcagat 61
Query: 510 ggtgccaagcatcacttcttcccatgtgagagtggaagaggaagaaattgcttcagatct 569
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 ggtgccaagcatcacttcttcccatgtgagggtggaagaggaagaaattgcttcagatct 121
Query: 570 tcgaaactcagcacaagacaacagagctgaagtgccaatgaatgtaaacacacagcaaaa 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcgaaactcagcacaagacaacagagctgaagtgccaatgaatgtaaacacacagcaaaa 181
Query: 630 tgcaagagaggcagtgaaccaaggagtgttgcagactataaatagaaacaacactcaact 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgcaagagaggcagtgaaccaaggagtgttgcagactataaatagaaacaacactcaact 241
Query: 690 acagcacaataacacagtgtggctgagaaatgcggccgaagattctaccgcagaatcttc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acagcacaataacacagtgtggctgagaaatgcggccgaagattctaccgcagaatcttc 301
Query: 750 aagtagtactaggagagaaagagatgggggtgttgtcccggtgtggtctcccccagcttc 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagtagtactaggagagaaagagatgggggtgttgtcccggtgtggtctcccccagcttc 361
Query: 810 tagtttctcagagcaatttgtagatgatgaaaatggtataggagctagttcatcctactt 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tagtttctcagagcaatttgtagatgatgaaaatggtataggagctagttcatcctactt 421
Query: 870 gcagaggcatcctcagtctcaccaaatgatgaattggactaggctacctcaaactgggta 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcagaggcatcctcagtctcaccaaatgatgaattggactaggctacctcaaactgggta 481
Query: 930 a 930
|
Sbjct: 482 a 482
>gnl|LJGI|TC69022 similar to UniRef100_Q6EAN1 Cluster: Mutant cryptochrome 1-1
protein; n=1; Pisum sativum|Rep: Mutant cryptochrome 1-1
protein - Pisum sativum (Garden pea), partial (31%)
Length = 995
Score = 256 bits (129), Expect = 2e-67
Identities = 533/664 (80%), Gaps = 9/664 (1%)
Strand = Plus / Plus
Query: 247 ggaattgaacttgggtcaaactaccctcttccaattgttggaatagatgcagcaaaagca 306
|||||||| || || ||||| || |||||||||||||| | |||||| ||||||||||
Sbjct: 3 ggaattgagctgggatcaaattatcctcttccaattgtggaaatagaggcagcaaaagtc 62
Query: 307 agattgcaggaagcactgttacaaatgtggcaacaagaagcagcttcaagagctgcaatg 366
||| | | ||||| || ||| |||||||||||| || ||||||||||||||||||||
Sbjct: 63 agactagaagaagctctattagaaatgtggcaactcgaggcagcttcaagagctgcaatt 122
Query: 367 gaaaacggaaccgaggaagggcttggagactcctctgaatcagcccctattgcttttcct 426
||||| ||||| |||||||| |||||||||||||||||||| | |||| ||||||| |||
Sbjct: 123 gaaaatggaactgaggaaggacttggagactcctctgaatctgtccctcttgctttccct 182
Query: 427 caagacatgataatggaggaggaaagacatgaacctgttaggaacaatccccctcatggt 486
|||||| | || ||||||||| ||||| |||||||||||| ||||||| |
Sbjct: 183 caagacgtacatat---ggaggaaagtcatgagattgttaggaacaacccccctcccatt 239
Query: 487 actcgacgctaccaggatcagatggtgccaagcatcacttcttcccatgtgagagtggaa 546
||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||||
Sbjct: 240 actcgacgctaccaggaccagatggttccaagcatgacttcttccctggtgagagtggaa 299
Query: 547 gaggaagaaattgcttcagatcttcgaaactcagcacaaga---caacagagctgaagtg 603
|||||||||| | | | |||||||||||| | ||| |||| || ||||||||||||
Sbjct: 300 gaggaagaaacttcattggatcttcgaaacacggcagaagatagcagcagagctgaagtt 359
Query: 604 ccaatgaatgtaaacacacagcaaaatgcaagagaggcagtgaaccaaggagtgttgcag 663
||| | ||||||| | |||| ||||||||| ||| || |||| |||| ||||||||
Sbjct: 360 ccagtaaatgtaaccgcacaacaaaatgcagtagacacattgaatgaagggatgttgcag 419
Query: 664 actataaatagaaacaacactcaactacagcacaataacacagtgtggctgagaaatgcg 723
||| | |||| || || || | |||| | ||| || || ||||||||||||
Sbjct: 420 actgttcataggaa-tactctgcaataca--atcatactgcaatggagctgagaaatgca 476
Query: 724 gccgaagattctaccgcagaatcttcaagtagtactaggagagaaagagatgggggtgtt 783
|| || ||||| || | ||| |||||| |||||| ||||||||||| || || || |
Sbjct: 477 gctgacgattccacagtagattcttcaggtagtagcaggagagaaagggacggaggcata 536
Query: 784 gtcccggtgtggtctcccccagcttctagtttctcagagcaatttgtagatgatgaaaat 843
|| |||| |||| ||| |||||||| |||| |||||| |||||||||| |||||||||
Sbjct: 537 gttccggaatggtttccaccagcttccagttactcagaacaatttgtaggagatgaaaat 596
Query: 844 ggtataggagctagttcatcctacttgcagaggcatcctcagtctcaccaaatgatgaat 903
||||||||| |||||||| |||||||| |||||||||||||||| |||| || |||||
Sbjct: 597 ggtataggaagcagttcatcttacttgcaaaggcatcctcagtctcgccaattggtgaat 656
Query: 904 tgga 907
||||
Sbjct: 657 tgga 660
>gnl|LJGI|AV777588 similar to UniRef100_Q309E8 Cluster: Cryptochrome 1; n=1; Nicotiana
sylvestris|Rep: Cryptochrome 1 - Nicotiana sylvestris
(Wood tobacco), partial (5%)
Length = 457
Score = 81.8 bits (41), Expect = 7e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 835 gatgaaaatggtataggagctagttcatcctacttgcagaggcatcctcagtctcaccaa 894
|||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 451 gatgaaaatggtataggaagcagttcatcttacttgcaaaggcatcctcagtctcgccaa 392
Query: 895 atgatgaattgga 907
|| |||||||||
Sbjct: 391 ttggtgaattgga 379