Miyakogusa Predicted Gene

Lj0g3v0011399.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0011399.1 tr|F5L847|F5L847_9BACI DNA polymerase IV
OS=Caldalkalibacillus thermarum TA2.A1 GN=dinB PE=3 SV=1,40.91,1.4,
,NODE_78359_length_768_cov_12.574219.path1.1
         (248 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71286                                                      476   e-134

>gnl|LJGI|TC71286 
          Length = 795

 Score =  476 bits (240), Expect = e-134
 Identities = 246/248 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcattatctgccatgtccggtcaagtattattccctgcctgattgtttggtgttgttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atgcattatctgccatgtccggtcaagtattattccctgcctgattgtttggtgttgttg 550

                                                                       
Query: 61  ctcgaattttccgaacgtgtgggtcgtgtggcttctctaaatggaaccatcaattctgtt 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctcgaattttctgaacgtgtgggtcgtgtggcttctctaaatggaaccatcaattctgtt 610

                                                                       
Query: 121 gttagcattgcagtggcagtgtgccacattagaattggtgtacttgagctgattagtctt 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gttagcattgtagtggcagtgtgccacattagaattggtgtacttgagctgattagtctt 670

                                                                       
Query: 181 ttgttggtcttttttagaatattgcaaccaagtgcatggtgcttattgatttgcttaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttgttggtcttttttagaatattgcaaccaagtgcatggtgcttattgatttgcttaatt 730

                   
Query: 241 ttataggt 248
           ||||||||
Sbjct: 731 ttataggt 738