Miyakogusa Predicted Gene
- Lj0g3v0011199.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0011199.2 Non Chatacterized Hit- tr|A3AI33|A3AI33_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,24.81,3e-18,no
description,NULL; Gelsolin,Gelsolin domain; Actin depolymerizing
proteins,NULL; Gelsolin homology,CUFF.1116.2
(1422 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP055885 similar to UniRef100_A7PWH1 Cluster: Chromosom... 894 0.0
gnl|LJGI|BP065117 similar to UniRef100_O81645 Cluster: Villin-3;... 852 0.0
gnl|LJGI|TC81058 similar to UniRef100_O81645 Cluster: Villin-3; ... 759 0.0
gnl|LJGI|DC593219 similar to UniRef100_O81645 Cluster: Villin-3;... 281 6e-75
>gnl|LJGI|BP055885 similar to UniRef100_A7PWH1 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 464
Score = 894 bits (451), Expect = 0.0
Identities = 463/466 (99%), Gaps = 2/466 (0%)
Strand = Plus / Minus
Query: 416 cacatttgtatgtctgtaaagggaaaagagcagtcagattgaaagaggtcccttttgcaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cacatttgtatgtctgtaaagggaaaagagcagtcagattgaaagaggtcccttttgcaa 405
Query: 476 ggtcttcattgaaccatgatgatgtattcatcctcaacactcaaaataagatttatcagt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggtcttcattgaaccatgatgatgtattcatcctcaacactcaaaataagatttatcagt 345
Query: 536 tcaatggtgcaaattcaaatattcaggaaagagccaaggctttggaagttatacagtttc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcaatggtgcaaattcaaatattcaggaaagagccaaggctttggaagttatacagtttc 285
Query: 596 tgaaagaaaaatatcatgaaggaaaatgcgatgtggcaattgttgatgatggcaagttag 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgaaagaaaaatatcatgaaggaaaatgcgatgtggcaattgttgatgatggcaagttag 225
Query: 656 acactgagtcagactcgggtgaattttgggtcctctttggtggttttgcgcccattggga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 acactgagtcagactcgggtgaattttgggtcctctttggtggttttgcgcccattggga 165
Query: 716 agaaggtaatcagtgaggatgataacattccagaggcaattcccgctcagttgtatagta 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 agaaggtaatcagtgaggatgataacattccagaggcaattcccgctcagttgtatagta 105
Query: 776 tcgttgatggtgaggtcaagtctattgaaggtgaactatctaaatcactgctggaaaaca 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tcgttgatggtgaggtcaagtctattgaaggtgaactatctaaatcactgctggaaaaca 45
Query: 836 accaatgctatttattggactgtggtgctgaagtatttgtctgggt 881
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 --ccatgctatttattggactgtggtgctgaagtatttgtctgggt 1
>gnl|LJGI|BP065117 similar to UniRef100_O81645 Cluster: Villin-3; n=1; Arabidopsis
thaliana|Rep: Villin-3 - Arabidopsis thaliana (Mouse-ear
cress), partial (15%)
Length = 532
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 1 atgtctagcacgacaaaagtcttggatcctgcattccaaggagtgggtcaaagattagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgtctagcacgacaaaagtcttggatcctgcattccaaggagtgggtcaaagattagga 162
Query: 61 actgaaatatggaggattgaaaattttcagccagttccattgcccaaatctgaatatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 actgaaatatggaggattgaaaattttcagccagttccattgcccaaatctgaatatggg 222
Query: 121 aaattctacatgggagattcatacatcatcttgcagacaaggcaaggcaaaggaggaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aaattctacatgggagattcatacatcatcttgcagacaaggcaaggcaaaggaggaact 282
Query: 181 tatttttacgatttacacttctggattggaaaggatacaagtcaggatgaagctggaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tatttttacgatttacacttctggattggaaaggatacaagtcaggatgaagctggaact 342
Query: 241 gcagccattaaagctgttgaacttgatgcagctcttggaggacgtgcagtgcaacacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gcagccattaaagctgttgaacttgatgcagctcttggaggacgtgcagtgcaacacagg 402
Query: 301 gaaattcaaggacatgaatctgacaaatttttgtcatactttaagccttgtataatacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gaaattcaaggacatgaatctgacaaatttttgtcatactttaagccttgtataatacca 462
Query: 361 ttagaggggggtgttgcatctggatttagaaaacctgaagaagaggagtttgaaacacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttagaggggggtgttgcatctggatttagaaaacctgaagaagaggagtttgaaacacat 522
Query: 421 ttgtatgtct 430
||||||||||
Sbjct: 523 ttgtatgtct 532
>gnl|LJGI|TC81058 similar to UniRef100_O81645 Cluster: Villin-3; n=1; Arabidopsis
thaliana|Rep: Villin-3 - Arabidopsis thaliana (Mouse-ear
cress), partial (26%)
Length = 1227
Score = 759 bits (383), Expect = 0.0
Identities = 608/683 (89%)
Strand = Plus / Plus
Query: 14 caaaagtcttggatcctgcattccaaggagtgggtcaaagattaggaactgaaatatgga 73
||||||| |||||||| |||||||| ||||| || |||||| |||| |||||||||||||
Sbjct: 316 caaaagttttggatccagcattccagggagtaggccaaagagtagggactgaaatatgga 375
Query: 74 ggattgaaaattttcagccagttccattgcccaaatctgaatatgggaaattctacatgg 133
| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 376 gaattgagaattttcagccagttccattgcccaaatctgaacatgggaaattctacatgg 435
Query: 134 gagattcatacatcatcttgcagacaaggcaaggcaaaggaggaacttatttttacgatt 193
||||||| ||||||||||| ||||||| ||||||||||| || | |||| ||| |||
Sbjct: 436 gagattcttacatcatcttacagacaacacaaggcaaagggggcagttatctttttgata 495
Query: 194 tacacttctggattggaaaggatacaagtcaggatgaagctggaactgcagccattaaag 253
| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 496 ttcacttctggattggcaaggatacaagtcaggatgaagctggcactgcagccattaaaa 555
Query: 254 ctgttgaacttgatgcagctcttggaggacgtgcagtgcaacacagggaaattcaaggac 313
||||||||||||||||| |||||||||||||||| || || ||||||||||| ||||| |
Sbjct: 556 ctgttgaacttgatgcatctcttggaggacgtgctgttcagcacagggaaatccaagggc 615
Query: 314 atgaatctgacaaatttttgtcatactttaagccttgtataataccattagaggggggtg 373
||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 616 atgaatctgacaagtttttgtcatactttaagccatgtattataccattagaggggggtg 675
Query: 374 ttgcatctggatttagaaaacctgaagaagaggagtttgaaacacatttgtatgtctgta 433
| || ||||| |||| || |||||||||||||||||||||||||| ||||||||| || |
Sbjct: 676 tcgcctctggttttaaaacacctgaagaagaggagtttgaaacacgtttgtatgtatgca 735
Query: 434 aagggaaaagagcagtcagattgaaagaggtcccttttgcaaggtcttcattgaaccatg 493
| || ||| ||| |||||| | ||| |||||||||| ||| |||||||| |||| || |
Sbjct: 736 agggaaaacgagttgtcagaataaaacaggtccctttcgcacggtcttcactgaatcacg 795
Query: 494 atgatgtattcatcctcaacactcaaaataagatttatcagttcaatggtgcaaattcaa 553
|||||||||||||||| | ||||| |||||||||| || ||||||||||||||||| |
Sbjct: 796 atgatgtattcatcctagatactcaggataagatttaccaattcaatggtgcaaattcca 855
Query: 554 atattcaggaaagagccaaggctttggaagttatacagtttctgaaagaaaaatatcatg 613
|||||||||||||||||||||| ||||||||||| ||||| |||| ||||| |||||||
Sbjct: 856 atattcaggaaagagccaaggccttggaagttattcagttattgaaggaaaagtatcatg 915
Query: 614 aaggaaaatgcgatgtggcaattgttgatgatggcaagttagacactgagtcagactcgg 673
|||| |||||||| || ||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 916 aagggaaatgcgacgttgcaattgttgatgatggcaagttggatactgagtcagactcag 975
Query: 674 gtgaattttgggtcctctttggt 696
|||||||||||||||||||||||
Sbjct: 976 gtgaattttgggtcctctttggt 998
Score = 91.7 bits (46), Expect = 1e-17
Identities = 72/78 (92%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 841 tgctattta-ttggactgtggtgctgaagtatttgtctggg-ttggccgagtaacacaag 898
||||||||| ||||||||||||||||| |||| |||||||| ||||| | ||||||||||
Sbjct: 1150 tgctatttacttggactgtggtgctgaggtatatgtctggggttggcggggtaacacaag 1209
Query: 899 ttgaagaacgaaaagcag 916
||||||||||||||||||
Sbjct: 1210 ttgaagaacgaaaagcag 1227
>gnl|LJGI|DC593219 similar to UniRef100_O81645 Cluster: Villin-3; n=1; Arabidopsis
thaliana|Rep: Villin-3 - Arabidopsis thaliana (Mouse-ear
cress), partial (8%)
Length = 566
Score = 281 bits (142), Expect = 6e-75
Identities = 214/238 (89%)
Strand = Plus / Plus
Query: 14 caaaagtcttggatcctgcattccaaggagtgggtcaaagattaggaactgaaatatgga 73
||||||| |||||||| |||||||| ||||| || |||||| |||| |||||||||||||
Sbjct: 329 caaaagttttggatccagcattccagggagtaggccaaagagtagggactgaaatatgga 388
Query: 74 ggattgaaaattttcagccagttccattgcccaaatctgaatatgggaaattctacatgg 133
| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 389 gaattgagaattttcagccagttccattgcccaaatctgaacatgggaaattctacatgg 448
Query: 134 gagattcatacatcatcttgcagacaaggcaaggcaaaggaggaacttatttttacgatt 193
||||||| ||||||||||| ||||||| ||||||||||| || | |||| ||| |||
Sbjct: 449 gagattcttacatcatcttacagacaacacaaggcaaagggggcagttatctttttgata 508
Query: 194 tacacttctggattggaaaggatacaagtcaggatgaagctggaactgcagccattaa 251
| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 509 ttcacttctggattggcaaggatacaagtcaggatgaagctggcactgcagccattaa 566