Miyakogusa Predicted Gene
- Lj0g3v0010099.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0010099.1 Non Chatacterized Hit- tr|E0CVB7|E0CVB7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,54.88,3e-17,
,gene.g899.t1.1
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66152 weakly similar to UniRef100_A7QEW3 Cluster: Chr... 468 e-131
gnl|LJGI|TC65068 UniRef100_Q8M1U9 Cluster: Cytochrome c oxidase ... 139 2e-32
gnl|LJGI|TC82390 129 2e-29
gnl|LJGI|BP033777 similar to UniRef100_A5G344 Cluster: Helicase ... 92 5e-18
gnl|LJGI|BP033716 86 3e-16
gnl|LJGI|TC67529 weakly similar to UniRef100_Q30WZ7 Cluster: Pot... 86 3e-16
gnl|LJGI|BU494263 UniRef100_Q4RK50 Cluster: Chromosome 2 SCAF150... 84 1e-15
gnl|LJGI|TC69458 weakly similar to UniRef100_A7QEW3 Cluster: Chr... 72 4e-12
gnl|LJGI|TC82520 weakly similar to UniRef100_Q9Y001 Cluster: Int... 68 7e-11
gnl|LJGI|TC69231 66 3e-10
>gnl|LJGI|TC66152 weakly similar to UniRef100_A7QEW3 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 736
Score = 468 bits (236), Expect = e-131
Identities = 247/250 (98%), Gaps = 3/250 (1%)
Strand = Plus / Plus
Query: 246 acctggctgttggtatcctgttggactagcacagatggaaaaatggattgctttagatca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctggctgttggtatcctgttggactagcacagatggaaaaatggattgctttagatca 60
Query: 306 ggaacatgtacgagagcaggtgaaattcattgcatcaaacgttactcatgagaaaag--- 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaacatgtacgagagcaggtgaaattcattgcatcaaacgttactcatgagaaaagcag 120
Query: 363 gtttgtgacctgtggatactcagcagtcgagccatgcagttattgttcagcatctgttct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttgtgacctgtggatactcagcagtcgagccatgcagttattgttcagcatctgttct 180
Query: 423 atttgagtcccccgagtttggtttttgtcaaggtgaaaattgcagcagtggcaatgttaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttgagtcccccgagtttggtttttgtcaaggtgaaaattgcagcagtggcaatgttaa 240
Query: 483 acgtcacagg 492
||||||||||
Sbjct: 241 acgtcacagg 250
>gnl|LJGI|TC65068 UniRef100_Q8M1U9 Cluster: Cytochrome c oxidase subunit I; n=1;
Sclerasterias mollis|Rep: Cytochrome c oxidase subunit I
- Sclerasterias mollis, partial (5%)
Length = 908
Score = 139 bits (70), Expect = 2e-32
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 152 ggaatcacagagagttggttggacttaggaggtcttgcttcaggccgatgggccagctga 211
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 726 ggaatcacagagagttggttggacttaggaggtcttgtttcaggccgatgggccagctta 785
Query: 212 ttctcagttttgagggat 229
||||||||||||||||||
Sbjct: 786 ttctcagttttgagggat 803
>gnl|LJGI|TC82390
Length = 878
Score = 129 bits (65), Expect = 2e-29
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 152 ggaatcacagagagttggttggacttaggaggtcttgcttcaggccgatgggccagctga 211
|||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |
Sbjct: 618 ggaatcacagagagttggttggacataggagatcttgtttcaggccgatgggccagctca 677
Query: 212 ttctcagttttgagggatggt 232
|||||||||||||||||||||
Sbjct: 678 ttctcagttttgagggatggt 698
>gnl|LJGI|BP033777 similar to UniRef100_A5G344 Cluster: Helicase domain protein; n=1;
Acidiphilium cryptum JF-5|Rep: Helicase domain protein
-, partial (1%)
Length = 576
Score = 91.7 bits (46), Expect = 5e-18
Identities = 96/110 (87%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 9 cctacgggtt-acggctgatctggctaccttggtttggtgtaagagacacgcgggcggaa 67
|||||||||| || ||||||||||||||||| || ||||||||||| ||||||||| ||
Sbjct: 573 cctacgggtttactgctgatctggctacctttgtgtggtgtaagaggcacgcgggccaaa 514
Query: 68 atggtcccaccgttgctggtgctaggattgatccg-ttgatgtccatccc 116
||||| ||||||| ||||||| |||| ||||| | ||||||||||||||
Sbjct: 513 atggttccaccgtggctggtgttagggctgatcggtttgatgtccatccc 464
>gnl|LJGI|BP033716
Length = 502
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 153 gaatcacagagagttggttggacttaggaggtcttgcttcaggccgatgggccagctgat 212
|||||||||||||||||||||||||||||||||||| |||||||| |||| || || ||
Sbjct: 83 gaatcacagagagttggttggacttaggaggtcttgtttcaggccattgggtcaacttat 142
Query: 213 tctcagttttg 223
||||| |||||
Sbjct: 143 tctcatttttg 153
>gnl|LJGI|TC67529 weakly similar to UniRef100_Q30WZ7 Cluster: Potassium channel
protein; n=1; Desulfovibrio desulfuricans G20|Rep:
Potassium channel protein - Desulfovibrio desulfuricans
(strain G20), partial (8%)
Length = 961
Score = 85.7 bits (43), Expect = 3e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 152 ggaatcacagagagttggttggacttaggaggtctt-gcttcaggccgatgggccagctg 210
|||||||||||||||||||||||||||||||||||| |||||||| |||| |||||
Sbjct: 228 ggaatcacagagagttggttggacttaggaggtcttattttcaggccattgggtcagctt 287
Query: 211 attctcagttttgagggat 229
|| ||||||||||||||||
Sbjct: 288 atactcagttttgagggat 306
Score = 83.8 bits (42), Expect = 1e-15
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 152 ggaatcacagagagttggttggacttaggaggtctt-gcttcaggccgatgggccagctg 210
|||||||||||||||||||||||||||||||||||| ||||| || |||| ||||
Sbjct: 717 ggaatcacagagagttggttggacttaggaggtcttattttcagaccattgggtcagcct 776
Query: 211 attctcagttttgagggatggt 232
||||||||||||||||||||||
Sbjct: 777 attctcagttttgagggatggt 798
>gnl|LJGI|BU494263 UniRef100_Q4RK50 Cluster: Chromosome 2 SCAF15032 whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:,
partial (3%)
Length = 406
Score = 83.8 bits (42), Expect = 1e-15
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 58 gcgggcggaaatggtcccaccgttgctggtgctaggattgatccgttgatgtccatcc 115
|||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 1 gcgggccgaaatggtcccaccgtggctggtgctagggctgatccgttgatgtccatcc 58
>gnl|LJGI|TC69458 weakly similar to UniRef100_A7QEW3 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 535
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 270 actagcacagatggaaaaatggattgctttagatcaggaacatgtacgagagcaggtgaa 329
||||||||||||| || |||||||||||||||||||||||||| | ||||| | ||||
Sbjct: 434 actagcacagatgcaactatggattgctttagatcaggaacatgcataagagcggttgaa 493
Query: 330 attcattg 337
||||||||
Sbjct: 494 attcattg 501
>gnl|LJGI|TC82520 weakly similar to UniRef100_Q9Y001 Cluster: Intermediate filament;
n=1; Myxicola infundibulum|Rep: Intermediate filament -
Myxicola infundibulum, partial (5%)
Length = 822
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 152 ggaatcacagagagttggttggacttaggaggtcttgcttcaggcc 197
|||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 742 ggaatcacagggagttggttggacttaggaggtcttgttttaggcc 697
>gnl|LJGI|TC69231
Length = 703
Score = 65.9 bits (33), Expect = 3e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 292 attgctttagatcaggaacatgtacgagagcaggtgaaattcattgcatcaaacgttact 351
||||||||||| || |||||||||||||||| | |||||||||||| |||||| ||| ||
Sbjct: 483 attgctttaga-catgaacatgtacgagagcggttgaaattcattgtatcaaaagttgct 541
Query: 352 catgagaaaaggt 364
||| | |||||||
Sbjct: 542 cataaaaaaaggt 554