Miyakogusa Predicted Gene
- Lj0g3v0009989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0009989.1 Non Chatacterized Hit- tr|I1KDE2|I1KDE2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.37,0,TRANSMEMBRANE
9 SUPERFAMILY PROTEIN,Nonaspanin (TM9SF); EMP70,Nonaspanin (TM9SF);
seg,NULL,gene.g893.t1.1
(1035 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome... 174 7e-43
gnl|LJGI|BP043644 similar to UniRef100_A7P650 Cluster: Chromosom... 133 2e-30
gnl|LJGI|TC63961 homologue to UniRef100_A7P650 Cluster: Chromoso... 98 1e-19
gnl|LJGI|TC78937 similar to UniRef100_A7PFR7 Cluster: Chromosome... 76 5e-13
gnl|LJGI|TC66728 similar to UniRef100_A7PFR7 Cluster: Chromosome... 76 5e-13
gnl|LJGI|BP074651 similar to UniRef100_A7PS47 Cluster: Chromosom... 68 1e-10
>gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (97%)
Length = 2158
Score = 174 bits (88), Expect = 7e-43
Identities = 361/452 (79%)
Strand = Plus / Plus
Query: 400 aatgctcttatttggggtcaaagatcttctggggctgtgccatttggaaccatgtttgct 459
|||||||| || ||||| |||| ||| ||||| |||||||||||||| || |||||||||
Sbjct: 1344 aatgctctcatatggggccaaaaatcatctggagctgtgccatttggtactatgtttgct 1403
Query: 460 cttgttttcttgtggtttggcatctcagttccactggtttttgttggtggacttctcggg 519
|| || || || |||||||| |||||||| ||||| |||||||| ||||| | | ||
Sbjct: 1404 ctggtctttttatggtttgggatctcagtcccacttgtttttgtgggtggctatgttgga 1463
Query: 520 ttcaaaaaaccaacaattgaggatcctgtgaagacaaacaagatagctaggcagatccca 579
|| || || || | |||||| |||||||||||||||||| || | |||||||| ||
Sbjct: 1464 tttaagaagcctgcgattgagagtcctgtgaagacaaacaaaatcccaaggcagatacct 1523
Query: 580 gagcaggcttggtacatgaactcagtctgctctattctgataggaggcattctcccattt 639
|||||||| |||||||||||| |||||| ||| || |||| || || || ||||||||
Sbjct: 1524 gagcaggcctggtacatgaacccagtcttctcagttttgattgggggaatactcccattc 1583
Query: 640 ggtgcagtttttattgagcttttcttcattctcacatcaatctggttgcatcaattctat 699
|| || ||||| ||||||||||||||||| || || ||||||||||| |||| || ||
Sbjct: 1584 ggagctgttttcattgagcttttcttcatccttacctcaatctggttaaatcagttttac 1643
Query: 700 tatttattcggttttctgttcatcgtgttcatcatcctcattatcacttgtgctgagatc 759
|| | || || || || || | || || ||||||||||| | || |||||||| ||
Sbjct: 1644 tacatctttgggttcctatttttggtcgtcctcatcctcattgttacctgtgctgaaata 1703
Query: 760 agcgttgttctctgctacttccagctgtgcagtgaagactacctttggtggtggaggtca 819
| | |||| ||||||||||||||| |||||||||| || ||| ||||||||| |||||
Sbjct: 1704 accattgtgctctgctacttccagttgtgcagtgaggattactcgtggtggtggcggtca 1763
Query: 820 tatctgacttcaggttcctctgcactttacct 851
|| || || || ||||| ||||||||||||||
Sbjct: 1764 tacctcacctctggttcttctgcactttacct 1795
Score = 56.0 bits (28), Expect = 5e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 61 gaagaagcacaggaagagacagggtggaagcttgtccatggtgatgtttttaggcc 116
|||||||| || |||||||| || ||||| ||||||||||| ||||| ||||||||
Sbjct: 1005 gaagaagcccaagaagagactggttggaaacttgtccatggggatgtctttaggcc 1060
>gnl|LJGI|BP043644 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (5%)
Length = 500
Score = 133 bits (67), Expect = 2e-30
Identities = 94/103 (91%)
Strand = Plus / Minus
Query: 933 gctgcttctttcttatgctttctttgtgttgactggtacaattggtttctatgcatgctt 992
|||||||||||| |||| |||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 500 gctgcttctttcatatggtttctttgtggtgactggtaccattggtttctatgcatgctt 441
Query: 993 ctggttcacaaggctgatatattcctcagtgaaagttgactga 1035
|| ||||||||||||||| ||||| || || ||||||||||||
Sbjct: 440 cttgttcacaaggctgatctattcttctgtaaaagttgactga 398
>gnl|LJGI|TC63961 homologue to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 980
Score = 97.6 bits (49), Expect = 1e-19
Identities = 232/293 (79%)
Strand = Plus / Plus
Query: 523 aaaaaaccaacaattgaggatcctgtgaagacaaacaagatagctaggcagatcccagag 582
||||||||| ||||||| || ||||||||||| || || || |||||||| | || |||
Sbjct: 83 aaaaaaccagcaattgaagaccctgtgaagactaataaaattcctaggcaggtacctgag 142
Query: 583 caggcttggtacatgaactcagtctgctctattctgataggaggcattctcccatttggt 642
||||| |||||||||| | |||| ||||||||| || || |||||||| |||||||||
Sbjct: 143 caggcatggtacatgacacccgtcttctctattcttattggtggcattcttccatttggt 202
Query: 643 gcagtttttattgagcttttcttcattctcacatcaatctggttgcatcaattctattat 702
||||| || || ||||| ||||| || || |||||||| ||| | | || ||||| ||
Sbjct: 203 gcagtgttcatcgagctcttctttatcctgacatcaatatggctaaaccagttctactac 262
Query: 703 ttattcggttttctgttcatcgtgttcatcatcctcattatcacttgtgctgagatcagc 762
| || || || || ||||| ||||| | ||||| | ||||| ||||| ||||| |
Sbjct: 263 atctttggcttccttttcatagtgtttgttatcctattgatcacctgtgcagagattacg 322
Query: 763 gttgttctctgctacttccagctgtgcagtgaagactacctttggtggtggag 815
||||| || ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 323 gttgtgctttgctacttccaattgtgcagtgaagactacaactggtggtggag 375
>gnl|LJGI|TC78937 similar to UniRef100_A7PFR7 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 1046
Score = 75.8 bits (38), Expect = 5e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 460 cttgttttcttgtggtttggcatctcagttccactggtttttgttggtgg 509
||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 218 cttgttttcttatggtttggcatctcagttccacttgtgtttgttggtgg 267
>gnl|LJGI|TC66728 similar to UniRef100_A7PFR7 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1205
Score = 75.8 bits (38), Expect = 5e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 460 cttgttttcttgtggtttggcatctcagttccactggtttttgttggtgg 509
||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 682 cttgttttcttatggtttggcatctcagttccacttgtgtttgttggtgg 731
Score = 60.0 bits (30), Expect = 3e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 728 tcatcatcctcattatcacttgtgctgagatcagcgttgttctctgctacttccagctgt 787
||||||| |||||| | |||||||||| ||||| | ||||||||||||||||||||||
Sbjct: 826 tcatcatactcattgttacttgtgctgcgatcacaatagttctctgctacttccagctgt 885
Query: 788 gcagtg 793
| ||||
Sbjct: 886 gtagtg 891
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 569 ggcagatcccagagcaggcttggtacatgaactca 603
||||||| ||||||||| |||||||||||||||||
Sbjct: 794 ggcagataccagagcagccttggtacatgaactca 828
>gnl|LJGI|BP074651 similar to UniRef100_A7PS47 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 487
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 460 cttgttttcttgtggtttggcatctcagttccactggtttttgttggtgg 509
||||||||||| | ||||||||||||||||||||| || |||||||||||
Sbjct: 167 cttgttttcttatcgtttggcatctcagttccacttgtgtttgttggtgg 118