Miyakogusa Predicted Gene

Lj0g3v0009879.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0009879.1 tr|G7I979|G7I979_MEDTR Receptor serine/threonine
kinase OS=Medicago truncatula GN=MTR_1g031540 PE=4
,45.83,0.00000000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
no description,NULL; Protein kinase-like
(PK-like),,NODE_70009_length_183_cov_81.169395.path3.1
         (216 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67150 similar to UniRef100_A7QEQ9 Cluster: Chromosome...   172   5e-43
gnl|LJGI|TC63071 similar to UniRef100_A7QEQ9 Cluster: Chromosome...   133   5e-31

>gnl|LJGI|TC67150 similar to UniRef100_A7QEQ9 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 878

 Score =  172 bits (87), Expect = 5e-43
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                       
Query: 130 aggcaaaacttccttggttggaaaagacttcatgaaattgctttaggaatagccaaggga 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   aggcaaaacttccttggttggaaaagacttcatgaaattgctttaggaatagccaaggga 61

                                      
Query: 190 attgagtatcttcaccaaggttgtaat 216
           |||||||||||||||||||||||||||
Sbjct: 62  attgagtatcttcaccaaggttgtaat 88


>gnl|LJGI|TC63071 similar to UniRef100_A7QEQ9 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 816

 Score =  133 bits (67), Expect = 5e-31
 Identities = 76/79 (96%)
 Strand = Plus / Plus

                                                                       
Query: 138 cttccttggttggaaaagacttcatgaaattgctttaggaatagccaagggaattgagta 197
           ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1   cttccttggttggaagaggcttcacgaaattgctttaggaatagccaagggaattgagta 60

                              
Query: 198 tcttcaccaaggttgtaat 216
           |||||||||||||||||||
Sbjct: 61  tcttcaccaaggttgtaat 79