Miyakogusa Predicted Gene
- Lj0g3v0009329.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0009329.1 Non Chatacterized Hit- tr|B9RHA6|B9RHA6_RICCO
Vacuolar proton atpase, putative OS=Ricinus communis
G,55.71,0.000000000000002,V_ATPase_I,ATPase, V0/A0 complex subunit a;
coiled-coil,NULL; VACUOLAR PROTON ATPASE,NULL; VACUOLAR
,gene.g823.t1.1
(1269 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59208 similar to UniRef100_A7NZD1 Cluster: Chromosome... 1061 0.0
gnl|LJGI|FS320479 similar to UniRef100_A7NZD1 Cluster: Chromosom... 470 e-131
gnl|LJGI|TC57883 similar to UniRef100_A7NZD1 Cluster: Chromosome... 335 4e-91
>gnl|LJGI|TC59208 similar to UniRef100_A7NZD1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 933
Score = 1061 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Plus
Query: 1 atggaccagttcatcgacaacttgccgccgatggatctgatgcgatcggagaagatgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atggaccagttcatcgacaacttgccgccgatggatctgatgcgatcggagaagatgacc 202
Query: 61 ttcgttcaactcatcatccccgccgagtccgctcaccgagccatctcctatttgggcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttcgttcaactcatcatccccgccgagtccgctcaccgagccatctcctatttgggcgaa 262
Query: 121 ctcggcctcctccaattccgagatttaaatgctgaaaaaagccctttccagagaacgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctcggcctcctccaattccgagatttaaatgctgaaaaaagccctttccagagaacgttt 322
Query: 181 gttaatcaggtcaagaggtgtgcagaaatgtcaagaaagctacgattcttcaaggatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gttaatcaggtcaagaggtgtgcagaaatgtcaagaaagctacgattcttcaaggatcaa 382
Query: 241 atcaataaagctggtctaatctcttctactcgtattgtattgcaacgggacattgactta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atcaataaagctggtctaatctcttctactcgtattgtattgcaacgggacattgactta 442
Query: 301 gaggatttggaggtacaacttgctgagcatgaacatgagctgattgaaatgaactctaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaggatttggaggtacaacttgctgagcatgaacatgagctgattgaaatgaactctaat 502
Query: 361 agtgacaaacttcgacaatcatataatgaacttctggaattcaagattgtattgcagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agtgacaaacttcgacaatcatataatgaacttctggaattcaagattgtattgcagaag 562
Query: 421 gcatgcggttttcttgtttcaagtaatggccatgctgtctcggacgagagagaattacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcatgcggttttcttgtttcaagtaatggccatgctgtctcggacgagagagaattacag 622
Query: 481 gagaatatatactcaaatgatgactatgttgagacagcatctttgcttgaacagg 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gagaatatatactcaaatgatgactatgttgagacagcatctttgcttgaacagg 677
Score = 87.7 bits (44), Expect = 2e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 532 caggcaagaacaaagattctgaagatttgtgaggcatttggtgc 575
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 caggcaagaacaaagattctgaagatttgtgaggcatttggtgc 933
>gnl|LJGI|FS320479 similar to UniRef100_A7NZD1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 758
Score = 470 bits (237), Expect = e-131
Identities = 461/535 (86%), Gaps = 3/535 (0%)
Strand = Plus / Plus
Query: 1 atggaccagttcatcgacaacttgccgccgatggatctgatgcgatcggagaagatgacc 60
||||| || ||||| || ||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 207 atggatcacttcatggaaaacttgccgccaatggatctcatgcgctccgagaagatgacc 266
Query: 61 ttcgttcaactcatcatccccgccgagtccgctcaccgagccatctcctatttgggcgaa 120
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||
Sbjct: 267 ttcgttcaactcatcatccccgccgagtccgctcaccgcgccgtctcctatttggccgaa 326
Query: 121 ctcggcctcctccaattccgagatttaaatgctgaaaaaagccctttccagagaacgttt 180
||||||||||| |||||||| || ||||||| |||||||||||| |||||||||||||||
Sbjct: 327 ctcggcctccttcaattccgtgacttaaatgatgaaaaaagccccttccagagaacgttt 386
Query: 181 gttaatcaggtcaagaggtgtgcagaaatgtcaagaaagctacgattcttcaaggatcaa 240
|| || ||||| ||| | ||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 387 gtcaaccaggtaaagcgatgtgcggaaatgtcaagaaaactacgatttctcaaggatcag 446
Query: 241 atcaataaagctggtctaatctcttctactcgtattgtattgcaacgggacattgactta 300
|||| |||||||||| ||||||||| ||| | | |||||| || ||| |||
Sbjct: 447 atcagtaaagctggtttaatctctt---ctcattccatcttgcaatcagatattttcttg 503
Query: 301 gaggatttggaggtacaacttgctgagcatgaacatgagctgattgaaatgaactctaat 360
||| |||| ||| |||| |||||||||||||||||||| | |||||||||||||| ||
Sbjct: 504 gagaatttagagatacatcttgctgagcatgaacatgaaataattgaaatgaactccaac 563
Query: 361 agtgacaaacttcgacaatcatataatgaacttctggaattcaagattgtattgcagaag 420
||||| |||||||| ||||||||||||||||| ||||||||||| |||||| |||| |||
Sbjct: 564 agtgagaaacttcggcaatcatataatgaactcctggaattcaaaattgtactgcaaaag 623
Query: 421 gcatgcggttttcttgtttcaagtaatggccatgctgtctcggacgagagagaattacag 480
||||| |||||||||||||||||| |||||| |||||| || || ||||||||| || ||
Sbjct: 624 gcatgtggttttcttgtttcaagtcatggccttgctgtttcagaagagagagaactagag 683
Query: 481 gagaatatatactcaaatgatgactatgttgagacagcatctttgcttgaacagg 535
|||||| | |||||||||| ||||||||||||||| ||| |||| |||||||||
Sbjct: 684 gagaatgtttactcaaatggagactatgttgagacaccatttttgtttgaacagg 738
>gnl|LJGI|TC57883 similar to UniRef100_A7NZD1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 794
Score = 335 bits (169), Expect = 4e-91
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 571 ggtgccaattgttatcctgttccagaagatataagtaagcagaggcaaataactagggag 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgccaattgttatcctgttccagaagatataagtaagcagaggcaaataactagggag 60
Query: 631 gtttcttcacgtcttactgacttagaggcaactttggatgctgggattaggcaccggaac 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttcttcacgtcttactgacttagaggcaactttggatgctgggattaggcaccggaac 120
Query: 691 aaagctctagcttctatcaccgaccatctagcaaactggatgaacatgg 739
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagctctagcttctatcaccgaccatctagcaaactggatgaacatgg 169