Miyakogusa Predicted Gene
- Lj0g3v0008819.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0008819.1 Non Chatacterized Hit- tr|C0HHB5|C0HHB5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,51.89,8e-19,seg,NULL;
Nucleoside_tran,Equilibrative nucleoside transporter; EQUILIBRATIVE
NUCLEOSIDE TRANSPORTER,gene.g774.t1.1
(822 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS350578 similar to UniRef100_A7R2T3 Cluster: Chromosom... 176 1e-43
gnl|LJGI|GO039930 similar to UniRef100_A7R2T3 Cluster: Chromosom... 80 2e-14
gnl|LJGI|BP064436 similar to UniRef100_A7R2T3 Cluster: Chromosom... 56 4e-07
gnl|LJGI|TC79319 similar to UniRef100_A7R2T3 Cluster: Chromosome... 54 1e-06
gnl|LJGI|FS345847 similar to UniRef100_A7Q3A6 Cluster: Chromosom... 52 6e-06
>gnl|LJGI|FS350578 similar to UniRef100_A7R2T3 Cluster: Chromosome undetermined
scaffold_448, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_448,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 655
Score = 176 bits (89), Expect = 1e-43
Identities = 155/177 (87%)
Strand = Plus / Minus
Query: 536 caagatacattccccttgtgcaatggcttaagttggaatctagaaagggtctactaattg 595
||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||| |
Sbjct: 423 caagatacattccccttgtgcaaagtctgaagttggaatccagaaagggtctactaatag 364
Query: 596 taagcctttcgcgattcttactaatcccagctttctattttactgcaaaatatggtgacc 655
|| ||| || |||||||| || || ||||| ||||| ||||| ||||||||||||||||
Sbjct: 363 caatcctgtctcgattcttgctgattccagcattctactttacagcaaaatatggtgacc 304
Query: 656 aagggtggatgattgtgctcacctccttcttggcactcaccaatggctatctcactg 712
|||| |||||||| | |||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 303 aaggatggatgatcctcctcacctccttcttgggacttaccaatggctatctaactg 247
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 433 tcaattttccctggattcttgtatgaaaacactggttcacatcagttaggcacatg 488
||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 479 tcaatcttccctgggttcttgtatgaaaacactgggtcacatcagctaggcacatg 424
Score = 56.0 bits (28), Expect = 4e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 783 tcttgactggctgtggctcataggtaaaggaacattctaa 822
|||||||||| | |||||||||||||||||| ||||||||
Sbjct: 140 tcttgactggttatggctcataggtaaaggatcattctaa 101
>gnl|LJGI|GO039930 similar to UniRef100_A7R2T3 Cluster: Chromosome undetermined
scaffold_448, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_448,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 778
Score = 79.8 bits (40), Expect = 2e-14
Identities = 220/280 (78%)
Strand = Plus / Minus
Query: 433 tcaattttccctggattcttgtatgaaaacactggttcacatcagttaggcacatggtac 492
|||||||||||||| ||||||| |||||||||||| | ||| || |||| ||||||
Sbjct: 547 tcaattttccctggtttcttgtttgaaaacactggattacacaagctaggggattggtac 488
Query: 493 ccaattgttttgattactatgtataatgtggtagatctcatatcaagatacattcccctt 552
|| ||||||| ||| | ||||| ||||| | ||||| ||||| ||||| ||||||||
Sbjct: 487 gcacttgttttaattgcaatgtacaatgtcttggatctaatatccagatatattcccctg 428
Query: 553 gtgcaatggcttaagttggaatctagaaagggtctactaattgtaagcctttcgcgattc 612
| |||| || ||||||||||| |||||||| || | |||| || || || |||||
Sbjct: 427 atcaaatgcctgaagttggaatccagaaagggcttattcattgcaattctgtctagattc 368
Query: 613 ttactaatcccagctttctattttactgcaaaatatggtgaccaagggtggatgattgtg 672
|| | ||||| || || || || || ||||||||||||||||| || ||||||||| |
Sbjct: 367 ttgttgatccctgcattttacttcacagcaaaatatggtgaccagggatggatgattttc 308
Query: 673 ctcacctccttcttggcactcaccaatggctatctcactg 712
|| || ||||||| ||| |||||||||||||||||||
Sbjct: 307 cttgtgtcattcttgggactaaccaatggctatctcactg 268
>gnl|LJGI|BP064436 similar to UniRef100_A7R2T3 Cluster: Chromosome undetermined
scaffold_448, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_448,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 494
Score = 56.0 bits (28), Expect = 4e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 783 tcttgactggctgtggctcataggtaaaggaacattctaa 822
|||||||||| | |||||||||||||||||| ||||||||
Sbjct: 141 tcttgactggttatggctcataggtaaaggatcattctaa 102
>gnl|LJGI|TC79319 similar to UniRef100_A7R2T3 Cluster: Chromosome undetermined
scaffold_448, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_448,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (53%)
Length = 1142
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 622 ccagctttctattttactgcaaaatatggtgaccaagggtggatgat 668
||||| || ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 454 ccagcattttatttcactgcaaagtatggtgaccaggggtggatgat 500
>gnl|LJGI|FS345847 similar to UniRef100_A7Q3A6 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 708
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 631 tattttactgcaaaatatggtgaccaagggtggatgat 668
||||| |||||||| ||||||||||| |||||||||||
Sbjct: 457 tatttcactgcaaagtatggtgaccaggggtggatgat 420