Miyakogusa Predicted Gene
- Lj0g3v0008659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0008659.1 tr|I1JKR6|I1JKR6_SOYBN Pectinesterase OS=Glycine
max PE=3 SV=1,69.6,0,seg,NULL; Pectin lyase-like,Pectin lyase
fold/virulence factor; Plant invertase/pectin
methylesteras,gene.g760.t1.1
(1488 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome... 1328 0.0
gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin met... 66 7e-10
gnl|LJGI|TC68067 similar to UniRef100_A0ZNK2 Cluster: Pectin met... 62 1e-08
gnl|LJGI|FS353542 similar to UniRef100_A2Q3Z8 Cluster: Pectinest... 58 2e-07
gnl|LJGI|TC81167 weakly similar to UniRef100_Q2HUN6 Cluster: RNA... 56 7e-07
gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectineste... 54 3e-06
>gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 1064
Score = 1328 bits (670), Expect = 0.0
Identities = 680/682 (99%), Gaps = 1/682 (0%)
Strand = Plus / Plus
Query: 808 gatgtatcaggggatggattttgggcaagagacataacgtttgagaacacagcaggccca 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gatgtatcaggggatggattttgggcaagagacataacgtttgagaacacagcaggccca 191
Query: 868 gaaaagcaccaagcagttgcactcaaatcaagctccgacttctcagttttctacaggtgc 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gaaaagcaccaagcagttgcactcaaatcaagctccgacttctcagttttctacaggtgc 251
Query: 928 agcttcaaagcctaccaggacactctctacgtgcactccaaccgccaattctaccgcgac 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agcttcaaagcctaccaggacactctctacgtgcactccaaccgccaattctaccgcgac 311
Query: 988 tgccacatatacggcaccatagacttcatctttggggacgccgcagcagtcctgcaaaac 1047
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 312 tgccacatatacggcaccatagacttcatctttggggacgccgcagcagttctgcaaaac 371
Query: 1048 tgcgacatcttcgtgaggaaaccgatgagtcagcaatccaacttcatcaccgcgcaagga 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgcgacatcttcgtgaggaaaccgatgagtcagcaatccaacttcatcaccgcgcaagga 431
Query: 1108 agagacgatcctaacaaaccaactgggatttcgatacagggttgcagggtcaggcccacc 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agagacgatcctaacaaaccaactgggatttcgatacagggttgcagggtcaggcccacc 491
Query: 1168 tccgaaggtgtttcttccaagaccttcctgggaaggccttggaagaaatactcgaggaca 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tccgaaggtgtttcttccaagaccttcctgggaaggccttggaagaaatactcgaggaca 551
Query: 1228 gtgtttatgaagagtgatttggatgggttgattcaccccagagggtggggtgagtggaga 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtgtttatgaagagtgatttggatgggttgattcaccccagagggtggggtgagtggaga 611
Query: 1288 ggaaattttgcactctctactct-gtactatggagagtatatgaacattggaagtggtgc 1346
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggaaattttgcactctctactctggtactatggagagtatatgaacattggaagtggtgc 671
Query: 1347 ttctacacagaatagggtgaattggcctggttttcatgtgctgaggagtgctggtgaggc 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttctacacagaatagggtgaattggcctggttttcatgtgctgaggagtgctggtgaggc 731
Query: 1407 agcaccatttactgtgagtcggtttttgcaaggggatcgttggattccagcttcaggggt 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agcaccatttactgtgagtcggtttttgcaaggggatcgttggattccagcttcaggggt 791
Query: 1467 gccattctcgtctgaaatttaa 1488
||||||||||||||||||||||
Sbjct: 792 gccattctcgtctgaaatttaa 813
>gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
communis (Pear), partial (40%)
Length = 825
Score = 65.9 bits (33), Expect = 7e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 940 taccaggacactctctacgtgcactccaaccgccaattctaccgcgactgccacatatac 999
||||||||||| | || || ||||||||||| |||||||||||||| || |||| |||
Sbjct: 645 taccaggacacaatgtatgtacactccaaccgtcaattctaccgcgagtgtgacatctac 704
Query: 1000 ggcaccatagacttcat 1016
|||||| ||||||||||
Sbjct: 705 ggcaccgtagacttcat 721
>gnl|LJGI|TC68067 similar to UniRef100_A0ZNK2 Cluster: Pectin methylesterase 4; n=1;
Pyrus communis|Rep: Pectin methylesterase 4 - Pyrus
communis (Pear), partial (38%)
Length = 934
Score = 61.9 bits (31), Expect = 1e-08
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 832 gcaagagacataacgtttgagaacacagcaggcccagaaaagcaccaagcagttgcactc 891
||||||||||| || ||||||||||||||||| ||||| || | |||||||| |||||
Sbjct: 149 gcaagagacatcacctttgagaacacagcagggccagagaataaacaagcagtagcacta 208
Query: 892 aaatcaagctccgacttctcagttttctacaggtgcagcttcaaagcctaccaggacact 951
| |||| ||||||| |||| || |||||| | || | |||||| |||||||||||
Sbjct: 209 agatcagactccgacctctctgtgttctaccgatgtgggatcaaaggctaccaggacagc 268
Query: 952 ctctacg 958
|||||||
Sbjct: 269 ctctacg 275
>gnl|LJGI|FS353542 similar to UniRef100_A2Q3Z8 Cluster: Pectinesterase; Pectinesterase
inhibitor; n=1; Medicago truncatula|Rep: Pectinesterase;
Pectinesterase inhibitor - Medicago truncatula (Barrel
medic), partial (41%)
Length = 711
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 838 gacataacgtttgagaacacagcaggcccagaaaagcaccaagcagttgcact 890
|||||| | ||||||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 704 gacatagcttttgagaacacggcagggccagagaagcatcaagcagttgcact 652
>gnl|LJGI|TC81167 weakly similar to UniRef100_Q2HUN6 Cluster: RNA-directed DNA
polymerase (Reverse transcriptase); Ribonuclease H; n=1;
Medicago truncatula|Rep: RNA-directed DNA polymerase
(Reverse transcriptase); Ribonuclease H - Medicago
truncatula (Barrel medic), partial (14%)
Length = 1309
Score = 56.0 bits (28), Expect = 7e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 853 aacacagcaggcccagaaaagcaccaagcagt 884
|||||||||||||||||||||||||| |||||
Sbjct: 350 aacacagcaggcccagaaaagcaccaggcagt 381
>gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectinesterase-3 precursor; n=1;
Phaseolus vulgaris|Rep: Pectinesterase-3 precursor -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(34%)
Length = 773
Score = 54.0 bits (27), Expect = 3e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 946 gacactctctacgtgcactccaaccgccaattctaccgcgactgccacatatacggcacc 1005
||||| ||||||| || ||||||||||||||||||||||| || |||| ||||||
Sbjct: 81 gacaccctctacgcacattccaaccgccaattctaccgcgaatgtgacatcactggcacc 140
Query: 1006 atagacttcat 1016
|||||||||||
Sbjct: 141 atagacttcat 151