Miyakogusa Predicted Gene
- Lj0g3v0008399.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0008399.1 Non Chatacterized Hit- tr|G7IAR6|G7IAR6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,73.2,0,DUF810,Protein of unknown function DUF810; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; coiled-c,CUFF.477.1
(3384 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP065804 similar to UniRef100_A7NXG2 Cluster: Chromosom... 771 0.0
gnl|LJGI|TC74982 similar to UniRef100_A7NXG2 Cluster: Chromosome... 141 3e-32
gnl|LJGI|AV769823 96 2e-18
gnl|LJGI|TC81301 similar to UniRef100_Q2HCX0 Cluster: Predicted ... 58 4e-07
gnl|LJGI|TC63633 similar to UniRef100_A7NXG2 Cluster: Chromosome... 56 1e-06
>gnl|LJGI|BP065804 similar to UniRef100_A7NXG2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 492
Score = 771 bits (389), Expect = 0.0
Identities = 391/392 (99%)
Strand = Plus / Plus
Query: 901 cttggccggcaagcagaaacgataatcctccccttggaactccttcgccacctaaaacct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 cttggccggcaagcagaaacgataatcctccccttggaactccttcgccacctaaaacct 160
Query: 961 tcagaattcagcaatccccatgagtaccatttatggcaaaagaggcagcttaagatcctt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tcagaattcagcaatccccatgagtaccatttatggcaaaagaggcagcttaagatcctt 220
Query: 1021 gaagccgggctcctgttgcacccttcaattcctgtagagaaaaacaacacatttgccatg 1080
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gaagccgggctcctgtngcacccttcaattcctgtagagaaaaacaacacatttgccatg 280
Query: 1081 aacctcagggacattattaacagtgctgaacttcaacctctagacactagcaaaacctca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aacctcagggacattattaacagtgctgaacttcaacctctagacactagcaaaacctca 340
Query: 1141 gaaaccatgagaaccttcagcaacgccgtggtttcgttgtcgatgagaagccctaatggc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gaaaccatgagaaccttcagcaacgccgtggtttcgttgtcgatgagaagccctaatggc 400
Query: 1201 attcccactaacgtttgccattgggctaatggataccctgtcaatattcacctctacatt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 attcccactaacgtttgccattgggctaatggataccctgtcaatattcacctctacatt 460
Query: 1261 tctcttcttcaatcgattttcgatctcgctga 1292
||||||||||||||||||||||||||||||||
Sbjct: 461 tctcttcttcaatcgattttcgatctcgctga 492
>gnl|LJGI|TC74982 similar to UniRef100_A7NXG2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (14%)
Length = 509
Score = 141 bits (71), Expect = 3e-32
Identities = 239/295 (81%)
Strand = Plus / Plus
Query: 2217 gcaaagagcaaaagaaactgaatcatggaatccaaagtctaaatcagagccgtatgcaaa 2276
|||||| |||||||| |||||| |||||||||||||||| ||| ||||||| |||||| |
Sbjct: 9 gcaaagggcaaaagagactgaaacatggaatccaaagtccaaaacagagccatatgcaca 68
Query: 2277 atcagtggtagagctgatgaatttggccaagaaaattgtgtacgaattcttccaaatccc 2336
||||| | ||||||||||| ||||||| | || || | |||||||||||| | ||
Sbjct: 69 atcagctgcggagctgatgaaattggccactacaactgcagaagaattcttccaagttcc 128
Query: 2337 aatatcaataactgaggatttagttgaagaacttgcagatggattaacaaaaatcatccg 2396
|||| |||| || || ||||||||| |||| ||||| |||||||| ||| || |||
Sbjct: 129 aatagcaattacagaagatttagttcaagatcttgctgatggattggaaaacctcttcct 188
Query: 2397 agagtacatgatgtttgttgcagcatgtggtttgaaagagaactacattccctcacttcc 2456
|| ||||||| |||||||||||||||||||| | | ||| ||||||||| |||||
Sbjct: 189 ggactacatgaagtttgttgcagcatgtggttcaagacagagttacattcccatgcttcc 248
Query: 2457 cccactgaccaggtgcaacaggaactcaaagttccacaagctgtggaagatagct 2511
|||||| ||||| |||||| | ||||||||||| |||||||||||||| ||||
Sbjct: 249 cccactaaccagatgcaaccgtgactcaaagttcaccaagctgtggaagaaagct 303
>gnl|LJGI|AV769823
Length = 293
Score = 95.6 bits (48), Expect = 2e-18
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 3337 gcaaatcattttttgaagaggacattccagatagctaaaaggagatga 3384
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gcaaatcattttttgaagaggacattccagatagctaaaaggagatga 246
>gnl|LJGI|TC81301 similar to UniRef100_Q2HCX0 Cluster: Predicted protein; n=1;
Chaetomium globosum|Rep: Predicted protein - Chaetomium
globosum (Soil fungus), partial (4%)
Length = 355
Score = 58.0 bits (29), Expect = 4e-07
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 1 atgggtctctacacccgccgccgccacga 29
|||||||||||||||||||||||||||||
Sbjct: 192 atgggtctctacacccgccgccgccacga 164
>gnl|LJGI|TC63633 similar to UniRef100_A7NXG2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (8%)
Length = 699
Score = 56.0 bits (28), Expect = 1e-06
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2587 agccgcggaacacagcgcctgtacattcgcctcaacaccttatactacctcctttctcaa 2646
||||||||||| || ||||| ||| |||| ||||||||||| |||||||||| ||||
Sbjct: 185 agccgcggaacgcaacgcctctacgttcgtctcaacaccttgcactacctcctcactcac 126
Query: 2647 atcccctctcttgacaaatc 2666
|||| ||| ||||| |||||
Sbjct: 125 atccactcccttgaaaaatc 106
Score = 56.0 bits (28), Expect = 1e-06
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 2452 cttcccccactgaccaggtgcaacaggaactcaaagttccacaagctgtggaagatagct 2511
||||||||||| ||||| |||||| | ||||||||||| |||||||||||||| ||||
Sbjct: 323 cttcccccactaaccagatgcaaccgtgactcaaagttcaccaagctgtggaagaaagct 264