Miyakogusa Predicted Gene

Lj0g3v0007899.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0007899.1 Non Chatacterized Hit- tr|K4D356|K4D356_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.61,6e-18,seg,NULL,CUFF.444.1
         (558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71411 similar to UniRef100_A5P4U8 Cluster: Amidase; n...    56   2e-07

>gnl|LJGI|TC71411 similar to UniRef100_A5P4U8 Cluster: Amidase; n=1; Methylobacterium
           sp. 4-46|Rep: Amidase - Methylobacterium sp. 4-46,
           partial (4%)
          Length = 550

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 422 tggagaaggagatgtgggaccggttttatagcactggattttggagaagcccttca 477
           ||||||||||||||||||| || || || | ||||||||| ||||||||| |||||
Sbjct: 224 tggagaaggagatgtgggagcgattctacaacactggattctggagaagctcttca 279