Miyakogusa Predicted Gene
- Lj0g3v0007239.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0007239.1 Non Chatacterized Hit- tr|I1KKL7|I1KKL7_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,34.98,3e-17,no
description,SRA-YDG; no description,NULL; SET and RING finger
associated domain. Domai,SRA-YDG; N,CUFF.429.1
(2341 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW621319 weakly similar to UniRef100_A7NXK6 Cluster: Ch... 910 0.0
gnl|LJGI|TC80882 similar to UniRef100_A7NXK6 Cluster: Chromosome... 276 6e-73
>gnl|LJGI|BW621319 weakly similar to UniRef100_A7NXK6 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 487
Score = 910 bits (459), Expect = 0.0
Identities = 468/471 (99%)
Strand = Plus / Plus
Query: 1543 atttcaaacaagaaggagaatgttgctattcggctttttaatgacatcgatgacaatcag 1602
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 17 atttcaaacaagaaggagaatgttgctactttgctttttaatgacatcgatgacaatcag 76
Query: 1603 gaccctctttattttgagtatcttccgcggactattttccctcagtttgtgtttcatcag 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gaccctctttattttgagtatcttccgcggactattttccctcagtttgtgtttcatcag 136
Query: 1663 agtgggaatgctactggttgtgattgtatagatggttgtgttgatggctgcttttgctct 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agtgggaatgctactggttgtgattgtatagatggttgtgttgatggctgcttttgctct 196
Query: 1723 atgaaaaatgggggcgagctcccttataatcaacatgggtttcttgtgaggggaaagcct 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgaaaaatgggggcgagctcccttataatcaacatgggtttcttgtgaggggaaagcct 256
Query: 1783 ttgatttttgaatgtggccctttttgcagctgtcctcctcattgtcgcaatcgtgctacc 1842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttgatttttgaatgtggccctttttgcagctgtcctcctcattgtcgcaatcgtgctacc 316
Query: 1843 caaaaaggtctgaaaagtaggttagaagtgtttcggtctgtgcagacgggttggggagtt 1902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caaaaaggtctgaaaagtaggttagaagtgtttcggtctgtgcagacgggttggggagtt 376
Query: 1903 aggtccttagacattattcatgctggtgcttttatctgtgagtatacaggggttgttttg 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggtccttagacattattcatgctggtgcttttatctgtgagtatacaggggttgttttg 436
Query: 1963 actagggagcaagcgcaaattttaacaatgaatggtgactcattgatatat 2013
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 actagggagcaagcgcaaattttaacaatgaatggtgactcattgatatat 487
>gnl|LJGI|TC80882 similar to UniRef100_A7NXK6 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (21%)
Length = 702
Score = 276 bits (139), Expect = 6e-73
Identities = 358/429 (83%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 1900 gttaggtccttagacattattcatgctggtgcttttatctgtgagtatacaggggttgtt 1959
||||||||||| ||| ||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 9 gttaggtccttggaccttattcaagctggcgcttttatctgcgagtacacaggggttgtt 68
Query: 1960 ttgactagggagcaagcgcaaattttaacaatgaatggtgactcattgatatatcctaat 2019
|||||| |||||||| ||||||| |||||||||||||| |||||||||||||| |
Sbjct: 69 ctgactacagagcaagccaaaattttgacaatgaatggtgatacattgatatatcctggt 128
Query: 2020 cggtttgcgtcaaaatgggcagaatggggggatttatctcaggtataccctgattat-aa 2078
|||||| | | ||||||||||||||||||||||||| | || || | |||| ||
Sbjct: 129 cggttttctgagaggtgggcagaatggggggatttatctctgatagactccacttatgaa 188
Query: 2079 gatcccatcatatcctgaggtgcctcctttagattattctctggatgtgtcaactatgag 2138
||| | ||||| | ||||||||| ||| | || ||||||| |||| |||||
Sbjct: 189 cgtccgaan-tatccgtcaattcctcctttanattttgctatggatgtatcaagaatgag 247
Query: 2139 gaatgttgcttgctatattagtcatagttcatccccaaatgtattagttcagtttgttct 2198
||||||||| |||||||||||||| |||||| | || ||||| || ||||||| ||||||
Sbjct: 248 gaatgttgcgtgctatattagtcacagttcaactcctaatgtgttggttcagtatgttct 307
Query: 2199 gcatgatcacaacaatttgatgttccctcaccttatgctatttgcaatggagaacatccc 2258
| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 308 gtttgatcacaataatttgatgttccctcaccttatgctattcgcaatggaaaacatccc 367
Query: 2259 tccaatgagagaactcagccttgattatggtgtagctgatgagtggacaggcaagctctc 2318
|||||||||||| ||||||||||||||||| ||||||||||||| || ||||| || ||
Sbjct: 368 tccaatgagagagctcagccttgattatggggtagctgatgagtttaccggcaaactatc 427
Query: 2319 tatatgtaa 2327
||||||||
Sbjct: 428 catatgtaa 436