Miyakogusa Predicted Gene
- Lj0g3v0006579.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0006579.1 tr|B9MXZ2|B9MXZ2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_594476 PE=4
SV=1,34.97,3e-18,SANTA,SANT associated; seg,NULL,CUFF.372.1
(2634 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71107 similar to UniRef100_A3ETG8 Cluster: Integrase;... 1211 0.0
gnl|LJGI|FS360912 similar to UniRef100_Q94A31 Cluster: AT5g02520... 1039 0.0
>gnl|LJGI|TC71107 similar to UniRef100_A3ETG8 Cluster: Integrase; n=1; Leptospirillum
sp. Group II UBA|Rep: Integrase - Leptospirillum sp.
Group II UBA, partial (5%)
Length = 664
Score = 1211 bits (611), Expect = 0.0
Identities = 629/635 (99%)
Strand = Plus / Plus
Query: 1 atggcggagtctactccaaatccaactcctcctccgtcaaacgccaccaactccgtcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 atggcggagtctactccaaatccaactcctcctccgtcaaacgccaccaactccgtcgcc 89
Query: 61 aaatcttcttctttccaacgaacggtttgcttatacgactggtggttgattcaagccaaa 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 90 aaatcttcttctttccaacgaacggttggcttatacgactggtggttgattcaagccaaa 149
Query: 121 aacgacttccatggaaagcgtttagccgtcgccggcgtctcttccaaaaaggatgaagcc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aacgacttccatggaaagcgtgtagccgtcgccggcgtctcttccaaaaaggatgaagcc 209
Query: 181 atgcgggtgtttgtttcggctcctattatcaaaagatatgatgtgttttcgcttgagacc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 atgcgggtgttagtttcggctcctattatcaaaagatatgatgtgttttcgcttgagacc 269
Query: 241 gcggatggtgtttacgttatcatcagtggtttcatcaaccaggagcgcactcgcgaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gcggatggtgtttacgttatcatcagtggtttcatcaaccaggagcgcactcgcgaaaat 329
Query: 301 ggttttgctcctgaggttttcaacagttttatatttggatttcctccaaactgggaaagc 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggtttcgctcctgaggttttcaacagttttatatttggatttcctccaaactgggaaagc 389
Query: 361 tatgctgtagattgcttcagggaagaatcgaccgcggccagtgattcaggcaatgctgct 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatgctgtagatcgcttcagggaagaatcgaccgcggccagtgattcaggcaatgctgct 449
Query: 421 cctgataatgtatcagcaattcgtccggaggtcttatctgaaggcaatgcagttcctgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cctgataatgtatcagcaattcgtccggaggtcttatctgaaggcaatgcagttcctgct 509
Query: 481 attgtagcaacaactcgtccagaaatatcatctgatgatgtgagaaagcccaatcctatt 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atcgtagcaacaactcgtccagaaatatcatctgatgatgtgagaaagcccaatcctatt 569
Query: 541 tcttcgatgtcaccagaagagactctgggagatcacgagaagccattccataaagatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcttcgatgtcaccagaagagactctgggagatcacgagaagccattccataaagatgaa 629
Query: 601 tctcttatatcaaaggagataagtggggttagtgg 635
|||||||||||||||||||||||||||||||||||
Sbjct: 630 tctcttatatcaaaggagataagtggggttagtgg 664
Score = 87.7 bits (44), Expect = 3e-16
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 1518 tgtgggaaagcccaatcctacttattcgatatcaccagataagaccctgggagatcatga 1577
|||| ||||||||||||||| || |||||| |||||||| |||| ||||||||||| ||
Sbjct: 548 tgtgagaaagcccaatcctatttcttcgatgtcaccagaagagactctgggagatcacga 607
Query: 1578 gaagcaattccataaagataaatccaatgtgtcaaaggagatgggtggggctagtg 1633
||||| ||||||||||||| |||| | | ||||||||||| |||||| |||||
Sbjct: 608 gaagccattccataaagatgaatctcttatatcaaaggagataagtggggttagtg 663
>gnl|LJGI|FS360912 similar to UniRef100_Q94A31 Cluster: AT5g02520/T22P11_110; n=1;
Arabidopsis thaliana|Rep: AT5g02520/T22P11_110 -
Arabidopsis, partial (10%)
Length = 763
Score = 1039 bits (524), Expect = 0.0
Identities = 524/524 (100%)
Strand = Plus / Minus
Query: 2043 gagacatagtgccaggttgcataatattgaagatgaatcccacgtgtcaaagaaaatagg 2102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gagacatagtgccaggttgcataatattgaagatgaatcccacgtgtcaaagaaaatagg 704
Query: 2103 tggcgatagtggcggtaatagacatagtgccaggttgcatagagttaaagtcttccagca 2162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tggcgatagtggcggtaatagacatagtgccaggttgcatagagttaaagtcttccagca 644
Query: 2163 gaaaaatcagcctgcttctgatggtcctctgaagcatccaggtaaagagcagagctcccc 2222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gaaaaatcagcctgcttctgatggtcctctgaagcatccaggtaaagagcagagctcccc 584
Query: 2223 ctcagtggccctggaaaattctagtgaagacggcctgaaaagttcggtgacacccattaa 2282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ctcagtggccctggaaaattctagtgaagacggcctgaaaagttcggtgacacccattaa 524
Query: 2283 gtcacagccaaagggcctagtaaacatattatctgagcagcttgttaaaaaatcttcatc 2342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gtcacagccaaagggcctagtaaacatattatctgagcagcttgttaaaaaatcttcatc 464
Query: 2343 caggatttatagttctatgtcagcagaaactgcaggccattataagaaaaggagaatggc 2402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 caggatttatagttctatgtcagcagaaactgcaggccattataagaaaaggagaatggc 404
Query: 2403 tgatataacaaaagcggtcagtcctaagagaaaaattactaaatctgtgtctgctgtgaa 2462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgatataacaaaagcggtcagtcctaagagaaaaattactaaatctgtgtctgctgtgaa 344
Query: 2463 atctccgcaaggaagggatttgagtcacttgaacaacagaagcaaccagaaaatatcctg 2522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atctccgcaaggaagggatttgagtcacttgaacaacagaagcaaccagaaaatatcctg 284
Query: 2523 tgtttctccagagtcattgagtttaagaaaatccaaatctggta 2566
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgtttctccagagtcattgagtttaagaaaatccaaatctggta 240
Score = 309 bits (156), Expect = 5e-83
Identities = 189/200 (94%)
Strand = Plus / Minus
Query: 1062 gagacgtagtgccaggttgcataatattgaagatgaatccaatgtgtcaaagaaaatagg 1121
||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 763 gagacatagtgccaggttgcataatattgaagatgaatcccacgtgtcaaagaaaatagg 704
Query: 1122 tggcgatagtggcagtaatagacgtagtgccaggttgcatagagttgaagttttccagca 1181
||||||||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||
Sbjct: 703 tggcgatagtggcggtaatagacatagtgccaggttgcatagagttaaagtcttccagca 644
Query: 1182 gaaaaatcagcctgcttctgatggtcctctgaagcatccagataaagagaagagctctcc 1241
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||
Sbjct: 643 gaaaaatcagcctgcttctgatggtcctctgaagcatccaggtaaagagcagagctcccc 584
Query: 1242 ctcagtggccttggaaaatt 1261
|||||||||| |||||||||
Sbjct: 583 ctcagtggccctggaaaatt 564
Score = 115 bits (58), Expect = 1e-24
Identities = 115/134 (85%)
Strand = Plus / Minus
Query: 630 tagtggcgggaatagacgtagtgccaggttgcttagcgttaaagtctgccagaagaagaa 689
||||||||| ||||||| |||||||||||||| ||| |||||||||| |||| |||| ||
Sbjct: 697 tagtggcggtaatagacatagtgccaggttgcatagagttaaagtcttccagcagaaaaa 638
Query: 690 tcagcctgcttctggaggtcctctgaagcacctggatacagagcagaactctacttcagt 749
|||||||||||||| |||||||||||||| | | || |||||||| ||| | |||||
Sbjct: 637 tcagcctgcttctgatggtcctctgaagcatccaggtaaagagcagagctccccctcagt 578
Query: 750 ggccttggaaaatt 763
|||| |||||||||
Sbjct: 577 ggccctggaaaatt 564
Score = 101 bits (51), Expect = 2e-20
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 1662 tagtgccaggttgcatagcgttaaagtctgccagaagaagaatcagcctgcttctggagg 1721
|||||||||||||||||| |||||||||| |||| |||| |||||||||||||||| ||
Sbjct: 679 tagtgccaggttgcatagagttaaagtcttccagcagaaaaatcagcctgcttctgatgg 620
Query: 1722 tcctctgaagcatctggataaagagaagaactatacctcagtggccttgga 1772
|||||||||||||| | ||||||| ||| || ||||||||||| ||||
Sbjct: 619 tcctctgaagcatccaggtaaagagcagagctccccctcagtggccctgga 569
Score = 54.0 bits (27), Expect = 5e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2031 tagtggcgggaagagacatagtgccaggttgcata 2065
||||||||| || ||||||||||||||||||||||
Sbjct: 697 tagtggcggtaatagacatagtgccaggttgcata 663