Miyakogusa Predicted Gene

Lj0g3v0005999.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0005999.1 Non Chatacterized Hit- tr|I1GRT8|I1GRT8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,46.46,8e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.353.1
         (372 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75891 similar to UniRef100_A7PG07 Cluster: Chromosome...   313   4e-85
gnl|LJGI|TC64789 similar to UniRef100_A7PTA8 Cluster: Chromosome...    64   6e-10

>gnl|LJGI|TC75891 similar to UniRef100_A7PG07 Cluster: Chromosome chr6 scaffold_15,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_15, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 726

 Score =  313 bits (158), Expect = 4e-85
 Identities = 317/370 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacgaggatgacccgtgattttgctgatactatgcagagagaagcaatgccggtggta 60
           ||||||||| || | |||||||||| |||||| ||||| |  || ||| |||| | ||| 
Sbjct: 264 atgacgagggtgtctcgtgattttggtgataccatgcaaaatgaggcagtgcctgcggtg 323

                                                                       
Query: 61  tcagctgatgtgatatttgcttctcttcgatttcctaattataaaattggagctaacaat 120
           ||  ||||||||| ||||||| ||    | ||||||| ||| || |||||||||||||||
Sbjct: 324 tcttctgatgtgacatttgctactagcaggtttcctagttacaagattggagctaacaat 383

                                                                       
Query: 121 cagatcatggagacaaagggtgatccgaaagtgctaactatgaaggaggttgttgcacgt 180
           ||||| |||||||| |||| |||||| |||||| |  ||||||||||||||||||| |||
Sbjct: 384 cagataatggagactaaggatgatcccaaagtggtgtctatgaaggaggttgttgctcgt 443

                                                                       
Query: 181 gagactgcgcagctgttggaacagcagaaacgtctgtcagttcgcgaccttgccagtaaa 240
           |||||||| ||| || ||||||||||||| ||||| || ||||| ||||| ||||  |||
Sbjct: 444 gagactgctcagttgctggaacagcagaaccgtctctcggttcgtgacctcgccaacaaa 503

                                                                       
Query: 241 tttgagaagggtttggctgctgctgctaagttgtctgaagaggctagacttagagaagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttgagaagggtttggctgctgctgctaagttgtctgaagaggctagacttagagaagca 563

                                                                       
Query: 301 gcttcactggaaaaacatgttcttttgaagaagcttcgagatgcactggagtgcttgaaa 360
           || ||  |||| |||||||||||||||||||||||| |||||||||| || | ||| | |
Sbjct: 564 gcatcgttggagaaacatgttcttttgaagaagcttagagatgcacttgaatccttaaga 623

                     
Query: 361 gggcgagtgg 370
           ||||||||||
Sbjct: 624 gggcgagtgg 633


>gnl|LJGI|TC64789 similar to UniRef100_A7PTA8 Cluster: Chromosome chr8 scaffold_29,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 846

 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 217 tcagttcgcgaccttgccagtaaatttgagaagggtttggctgctgctgctaagttgtct 276
           |||||||| ||||||||| |||||||||| |||   |||||||| |||||||||||||||
Sbjct: 532 tcagttcgtgaccttgcctgtaaatttgataagaacttggctgcagctgctaagttgtct 591