Miyakogusa Predicted Gene

Lj0g3v0005939.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0005939.1 Non Chatacterized Hit- tr|I1NLF8|I1NLF8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,51.75,7e-18,seg,NULL,CUFF.355.1
         (543 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65681 similar to UniRef100_A7PFW1 Cluster: Chromosome...  1063   0.0  

>gnl|LJGI|TC65681 similar to UniRef100_A7PFW1 Cluster: Chromosome chr6 scaffold_15,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_15, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (54%)
          Length = 943

 Score = 1063 bits (536), Expect = 0.0
 Identities = 543/544 (99%), Gaps = 1/544 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaaagatgttcgacaaaaagaagaaactagctcacggacatggacctcccaaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atgggaaagatgttcgacaaaaagaagaaactagctcacggacatggacctcccaaagaa 212

                                                                       
Query: 61  gattccaacatgctggaacaacaaatggacattaggtccatcatgaaagatgtccaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gattccaacatgctggaacaacaaatggacattaggtccatcatgaaagatgtccaaaat 272

                                                                       
Query: 121 ttcagctactcgcatatggcatggaaagagcgcaagaaaattgaaaataacaaggttgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttcagctactcgcatatggcatggaaagagcgcaagaaaattgaaaataacaaggttgtt 332

                                                                       
Query: 181 tctcttggtgggaagccccctaagaatcagagattacctttaagtgtggcacggccgatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tctcttggtgggaagccccctaagaatcagagattacctttaagtgtggcacggccgatg 392

                                                                       
Query: 241 atgaagaagcaaaaggagagggagcagaaaatgctccaagagaatatgattcttggacga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atgaagaagcaaaaggagagggagcagaaaatgctccaagagaatatgattcttggacga 452

                                                                       
Query: 301 tttggggggaagcttggtggtagcaataaaaaatcagttgggaagcacaagcctgagaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tttggggggaagcttggtggtagcaataaaaaatcagttgggaagcacaagcctgagaac 512

                                                                       
Query: 361 aggggtctgaaggcaagtgaagggcgttttagaaatggcatactcgacgtgaagcatttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aggggtctgaaggcaagtgaagggcgttttagaaatggcatactcgacgtgaagcatttg 572

                                                                       
Query: 421 ttaaactcagcaggaccatcaaaaaaccatgatactagtagaaccagtatgtttaactca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttaaactcagcaggaccatcaaaaaaccatgatactagtagaaccagtatgtttaactca 632

                                                                       
Query: 481 gggaacatg-aaaggaggtgggatgaaacatggtaaaaaaggtgctggtaagaaccggca 539
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gggaacatgaaaaggaggtgggatgaaacatggtaaaaaaggtgctggtaagaaccggca 692

               
Query: 540 ctga 543
           ||||
Sbjct: 693 ctga 696