Miyakogusa Predicted Gene
- Lj0g3v0005849.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0005849.1 Non Chatacterized Hit- tr|I0ZAF2|I0ZAF2_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,48.89,0.0000000000001,seg,NULL,CUFF.331.1
(807 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67810 similar to UniRef100_A7PFU9 Cluster: Chromosome... 1600 0.0
gnl|LJGI|AV772632 similar to UniRef100_A7PFU9 Cluster: Chromosom... 408 e-113
gnl|LJGI|TC77803 similar to UniRef100_A7QY41 Cluster: Chromosome... 52 5e-06
gnl|LJGI|TC73231 similar to UniRef100_Q9VQB6 Cluster: CG9866-PA,... 52 5e-06
>gnl|LJGI|TC67810 similar to UniRef100_A7PFU9 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 960
Score = 1600 bits (807), Expect = 0.0
Identities = 807/807 (100%)
Strand = Plus / Plus
Query: 1 atggaatccctgcaattcaaaccagagttcccccaaaatcagttgcatttcatgaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 atggaatccctgcaattcaaaccagagttcccccaaaatcagttgcatttcatgaacaaa 67
Query: 61 ctccatcccaatctcaatctcaatctcaaacccaccaccatttccttcattcacatcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctccatcccaatctcaatctcaatctcaaacccaccaccatttccttcattcacatcagg 127
Query: 121 gccttctgtgcttcttcatcttctccaatccaaaccaaagttcggcgcaaggttaaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gccttctgtgcttcttcatcttctccaatccaaaccaaagttcggcgcaaggttaaggct 187
Query: 181 tctgaatctgatgctcaactcaaggagaattggttggcttcactctcttacccgaatcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tctgaatctgatgctcaactcaaggagaattggttggcttcactctcttacccgaatcgt 247
Query: 241 ttgaatgaagagcaggacctgacccgcaaaaacgatgcctccgaatggatcctcggaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttgaatgaagagcaggacctgacccgcaaaaacgatgcctccgaatggatcctcggaatc 307
Query: 301 gacccggatgtctctggtgctgtggcgctgttgaaaacccatgattctgtttgctcacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gacccggatgtctctggtgctgtggcgctgttgaaaacccatgattctgtttgctcacct 367
Query: 361 caggtatttgactctcctcatgtgcaaatacttgttggcaaaagaacacggagacgttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caggtatttgactctcctcatgtgcaaatacttgttggcaaaagaacacggagacgttta 427
Query: 421 gatgccaagtctgtcgttgagttggttcgcagttttgatgctccacttggaaccacagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gatgccaagtctgtcgttgagttggttcgcagttttgatgctccacttggaaccacagca 487
Query: 481 tatatagagcagtcactcccttttccacaagatgggaagcagggctggtggagtggagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tatatagagcagtcactcccttttccacaagatgggaagcagggctggtggagtggagga 547
Query: 541 tttgggtatgggctatggattgggatcttagttgcttcagggttttcagttgttccagtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tttgggtatgggctatggattgggatcttagttgcttcagggttttcagttgttccagtg 607
Query: 601 ccatcttttacttggaaagcaaaatttgaactttctggaagcaggatttcaaaggatgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ccatcttttacttggaaagcaaaatttgaactttctggaagcaggatttcaaaggatgat 667
Query: 661 agcaggagagttgcagccacattatttccatcagttagttccctattacttaggaaaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agcaggagagttgcagccacattatttccatcagttagttccctattacttaggaaaaaa 727
Query: 721 gatcacggaagagctgaggctttactgattgctgcatatggcaaagaccaaaagaagaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gatcacggaagagctgaggctttactgattgctgcatatggcaaagaccaaaagaagaat 787
Query: 781 agcttggaaggaaccttgtcacactaa 807
|||||||||||||||||||||||||||
Sbjct: 788 agcttggaaggaaccttgtcacactaa 814
>gnl|LJGI|AV772632 similar to UniRef100_A7PFU9 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 493
Score = 408 bits (206), Expect = e-113
Identities = 262/274 (95%), Gaps = 5/274 (1%)
Strand = Plus / Minus
Query: 494 cactcccttttccac-aagatgggaagcagggctggtggagtggaggatttgggtatggg 552
||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 493 cactcccttttccaccaagatgggaaccaggcctggtggagtggaggatttgggtatggg 434
Query: 553 ctatggattgggatcttagttgcttcagggttttcagttgttccagtgccatcttttact 612
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 433 ctatggattgggatcttaattgcttcagggttttcagttgtttcagtgccatcttttact 374
Query: 613 tggaaagcaaaatttgaactttctggaagcaggatttcaaaggatgatag-caggaga-g 670
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 373 tggaaagccaaatttgaactttctggaagcaggatttcaaaggatgatagccaggagacg 314
Query: 671 ttgcagccacattatttccatcagttagttccctattacttaggaaaaaagat-cacgga 729
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 313 gtgcagccacattagttccatcagttagttccctattacttaggaaaaaagatccacgga 254
Query: 730 agagctgaggctttactgattgc-tgcatatggc 762
||||||||||||||||||||||| ||||||||||
Sbjct: 253 agagctgaggctttactgattgcgtgcatatggc 220
>gnl|LJGI|TC77803 similar to UniRef100_A7QY41 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (33%)
Length = 1139
Score = 52.0 bits (26), Expect = 5e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 catcccaatctcaatctcaatctcaa 89
||||||||||||||||||||||||||
Sbjct: 258 catcccaatctcaatctcaatctcaa 283
>gnl|LJGI|TC73231 similar to UniRef100_Q9VQB6 Cluster: CG9866-PA, isoform A; n=1;
Drosophila melanogaster|Rep: CG9866-PA, isoform A -
Drosophila melanogaster (Fruit fly), partial (3%)
Length = 487
Score = 52.0 bits (26), Expect = 5e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 catcccaatctcaatctcaatctcaa 89
||||||||||||||||||||||||||
Sbjct: 239 catcccaatctcaatctcaatctcaa 264