Miyakogusa Predicted Gene

Lj0g3v0005539.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0005539.1 Non Chatacterized Hit- tr|I1M4P0|I1M4P0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.83,3e-18,VACUOLAR
PROTON ATPASE,NULL; VACUOLAR PROTON ATPASES,ATPase, V0/A0 complex
subunit a,CUFF.324.1
         (156 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59208 similar to UniRef100_A7NZD1 Cluster: Chromosome...   309   3e-84
gnl|LJGI|FS320479 similar to UniRef100_A7NZD1 Cluster: Chromosom...   186   3e-47

>gnl|LJGI|TC59208 similar to UniRef100_A7NZD1 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 933

 Score =  309 bits (156), Expect = 3e-84
 Identities = 156/156 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttttctccgagaaaatggaccagttcatcgacaacttgccgccgatggatctgatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggttttctccgagaaaatggaccagttcatcgacaacttgccgccgatggatctgatg 184

                                                                       
Query: 61  cgatcggagaagatgaccttcgttcaactcatcatccccgccgagtccgctcaccgagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cgatcggagaagatgaccttcgttcaactcatcatccccgccgagtccgctcaccgagcc 244

                                               
Query: 121 atctcctatttgggcgaactcggcctcctccaattc 156
           ||||||||||||||||||||||||||||||||||||
Sbjct: 245 atctcctatttgggcgaactcggcctcctccaattc 280


>gnl|LJGI|FS320479 similar to UniRef100_A7NZD1 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 758

 Score =  186 bits (94), Expect = 3e-47
 Identities = 130/142 (91%)
 Strand = Plus / Plus

                                                                       
Query: 15  gaaaatggaccagttcatcgacaacttgccgccgatggatctgatgcgatcggagaagat 74
           ||||||||| || ||||| || ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 203 gaaaatggatcacttcatggaaaacttgccgccaatggatctcatgcgctccgagaagat 262

                                                                       
Query: 75  gaccttcgttcaactcatcatccccgccgagtccgctcaccgagccatctcctatttggg 134
           |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| 
Sbjct: 263 gaccttcgttcaactcatcatccccgccgagtccgctcaccgcgccgtctcctatttggc 322

                                 
Query: 135 cgaactcggcctcctccaattc 156
           ||||||||||||||| ||||||
Sbjct: 323 cgaactcggcctccttcaattc 344