Miyakogusa Predicted Gene
- Lj0g3v0004549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0004549.1 tr|G0ZS34|G0ZS34_9ROSI Domain rearranged
methyltransferase 1 (Fragment) OS=Vitis amurensis
GN=DRM2a1,42.11,0.000000000000004,seg,NULL; SUBFAMILY NOT NAMED,NULL;
DNA (CYTOSINE-5-)-METHYLTRANSFERASE 3-RELATED,NULL;
S-adenosyl-L,NODE_19233_length_1612_cov_165.473938.path1.1
(1500 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79231 similar to UniRef100_Q76KU6 Cluster: DNA methyl... 1195 0.0
gnl|LJGI|AV413746 731 0.0
gnl|LJGI|TC60613 similar to UniRef100_A7PM76 Cluster: Chromosome... 642 0.0
gnl|LJGI|TC81808 638 0.0
gnl|LJGI|TC61976 weakly similar to UniRef100_A7NVV8 Cluster: Chr... 557 e-158
gnl|LJGI|AV417590 similar to UniRef100_A7PM76 Cluster: Chromosom... 505 e-142
gnl|LJGI|TC61034 similar to UniRef100_Q76KU6 Cluster: DNA methyl... 377 e-103
>gnl|LJGI|TC79231 similar to UniRef100_Q76KU6 Cluster: DNA methyltransferase; n=1;
Nicotiana tabacum|Rep: DNA methyltransferase - Nicotiana
tabacum (Common tobacco), partial (36%)
Length = 867
Score = 1195 bits (603), Expect = 0.0
Identities = 603/603 (100%)
Strand = Plus / Plus
Query: 898 agtgcaaaactgacagaaagaattcggaaggctgtagagaattatgatggagagccacct 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgcaaaactgacagaaagaattcggaaggctgtagagaattatgatggagagccacct 60
Query: 958 gaaagcgtccaaaagtatgtgctctatcagagtcggaagtggaatctggtttgggtggga 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaagcgtccaaaagtatgtgctctatcagagtcggaagtggaatctggtttgggtggga 120
Query: 1018 aggaataaggttgccccactagaaccagatgaaatagaaacgcttttgggcttcccaagg 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaataaggttgccccactagaaccagatgaaatagaaacgcttttgggcttcccaagg 180
Query: 1078 aaccacacaagaggaggtggaatcagtaggactgacagatacaagtcccttggcaattca 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccacacaagaggaggtggaatcagtaggactgacagatacaagtcccttggcaattca 240
Query: 1138 ttccaggtggacacagttgcttaccacctgtcggttctgaaggagatgtaccctaagggt 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttccaggtggacacagttgcttaccacctgtcggttctgaaggagatgtaccctaagggt 300
Query: 1198 atgaatgttctttctctcttttcgggaattggcggtgctgaagtggctcttcatcgcctt 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaatgttctttctctcttttcgggaattggcggtgctgaagtggctcttcatcgcctt 360
Query: 1258 ggtatccctctaaagaatgttgtttcagttgaaaaatcagaagtgaataggaacattgtc 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtatccctctaaagaatgttgtttcagttgaaaaatcagaagtgaataggaacattgtc 420
Query: 1318 aggagttggtgggagcaaacaaatcagaaagggaatttgattgatctggatgatgtacag 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggagttggtgggagcaaacaaatcagaaagggaatttgattgatctggatgatgtacag 480
Query: 1378 ctgctggatgctgatcgtttggagcagctgatgagcgcgaccgggggctttgatctggtt 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgctggatgctgatcgtttggagcagctgatgagcgcgaccgggggctttgatctggtt 540
Query: 1438 attggtggcagtccatgtaataacctggctggtagtaacagggtcagccgggatggactg 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attggtggcagtccatgtaataacctggctggtagtaacagggtcagccgggatggactg 600
Query: 1498 gag 1500
|||
Sbjct: 601 gag 603
>gnl|LJGI|AV413746
Length = 369
Score = 731 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Plus
Query: 249 cctggtgtccttggtaaaaatgggcttcaaggaagaggaagctttaattgccatagaaag 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggtgtccttggtaaaaatgggcttcaaggaagaggaagctttaattgccatagaaag 60
Query: 309 attaggtccaaactcctcgcttgaagaactggttgattttataggtgttgctcaaatagc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attaggtccaaactcctcgcttgaagaactggttgattttataggtgttgctcaaatagc 120
Query: 369 gaaggcagaagatgcccttctacctcctgaggataagccgcgatataatgaactttctaa 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaggcagaagatgcccttctacctcctgaggataagccgcgatataatgaactttctaa 180
Query: 429 acccaaaaagcaaagatttaatgactgtgaagtccggggaaggaagaagccaaagactga 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acccaaaaagcaaagatttaatgactgtgaagtccggggaaggaagaagccaaagactga 240
Query: 489 gaacagaatcctgaatgaagatgatgatgatgtgccattacatcttccaaacccaatgat 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacagaatcctgaatgaagatgatgatgatgtgccattacatcttccaaacccaatgat 300
Query: 549 tgggtttgggattcccaatgagtctttcttgactacacacagaaaacttccaggggatgc 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggtttgggattcccaatgagtctttcttgactacacacagaaaacttccaggggatgc 360
Query: 609 tctggggcc 617
|||||||||
Sbjct: 361 tctggggcc 369
>gnl|LJGI|TC60613 similar to UniRef100_A7PM76 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 853
Score = 642 bits (324), Expect = 0.0
Identities = 522/588 (88%)
Strand = Plus / Plus
Query: 913 gaaagaattcggaaggctgtagagaattatgatggagagccacctgaaagcgtccaaaag 972
||||||||| |||| || ||||||| ||||||||||| ||||| || || || || |||
Sbjct: 34 gaaagaattaggaaagcgctagagaactatgatggagatccacccgagagtgttcagaag 93
Query: 973 tatgtgctctatcagagtcggaagtggaatctggtttgggtgggaaggaataaggttgcc 1032
||||| || | || | || || |||||||| ||||||||||| |||||||||||||||
Sbjct: 94 tatgttcttgaccaatgccgcaaatggaatctagtttgggtgggcaggaataaggttgcc 153
Query: 1033 ccactagaaccagatgaaatagaaacgcttttgggcttcccaaggaaccacacaagagga 1092
|||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 154 ccactagagccagatgaagttgaaacacttttgggcttcccaaggaaccacacaagggga 213
Query: 1093 ggtggaatcagtaggactgacagatacaagtcccttggcaattcattccaggtggacaca 1152
|||||||||||||| || ||||||| |||||||||||||| |||||||||||||||||
Sbjct: 214 ggtggaatcagtagaacagacagatttaagtcccttggcaactcattccaggtggacacg 273
Query: 1153 gttgcttaccacctgtcggttctgaaggagatgtaccctaagggtatgaatgttctttct 1212
|| |||||||||||||| ||| ||||||| ||||||||||||||||| ||| | ||||||
Sbjct: 274 gtggcttaccacctgtcagttttgaaggatatgtaccctaagggtatcaatctcctttct 333
Query: 1213 ctcttttcgggaattggcggtgctgaagtggctcttcatcgccttggtatccctctaaag 1272
|||||||||||||| || ||||| ||||||||||||||||| |||||||||||| | |||
Sbjct: 334 ctcttttcgggaatcggtggtgcggaagtggctcttcatcggcttggtatccctttgaag 393
Query: 1273 aatgttgtttcagttgaaaaatcagaagtgaataggaacattgtcaggagttggtgggag 1332
||||| ||||| |||||||| || |||||||| || |||||||| |||||||||||||||
Sbjct: 394 aatgtagtttctgttgaaaagtctgaagtgaacagaaacattgttaggagttggtgggag 453
Query: 1333 caaacaaatcagaaagggaatttgattgatctggatgatgtacagctgctggatgctgat 1392
||||||||||||||||| ||||||||||||||||| ||||| |||| ||| |||| ||||
Sbjct: 454 caaacaaatcagaaaggtaatttgattgatctggaagatgtgcagcagctagatggtgat 513
Query: 1393 cgtttggagcagctgatgagcgcgaccgggggctttgatctggttattggtggcagtcca 1452
||| | |||||||||||||||| ||| ||||||||||||||| || ||||||| ||||||
Sbjct: 514 cgtctagagcagctgatgagcgtgactgggggctttgatctgattgttggtggtagtcca 573
Query: 1453 tgtaataacctggctggtagtaacagggtcagccgggatggactggag 1500
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgtaataacctggctggtagtaacagggtcagccgggatggactggag 621
>gnl|LJGI|TC81808
Length = 327
Score = 638 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Plus
Query: 535 ccaaacccaatgattgggtttgggattcccaatgagtctttcttgactacacacagaaaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ccaaacccaatgattgggtttgggattcccaatgagtctttcttgactacacacagaaaa 65
Query: 595 cttccaggggatgctctggggcctccttacttctattatgagaatgtggcatttgctcca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cttccaggggatgctctggggcctccttacttctattatgagaatgtggcatttgctcca 125
Query: 655 aaaggtgtttggcaaactatttcaagattcttgtttgatgtagagcccgaatttgtagat 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aaaggtgtttggcaaactatttcaagattcttgtttgatgtagagcccgaatttgtagat 185
Query: 715 tccaaatatttctgtgctgctgccaggaaaaggggctatattcacaatttgccaattgaa 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tccaaatatttctgtgctgctgccaggaaaaggggctatattcacaatttgccaattgaa 245
Query: 775 aatagattccccgttctaccacagccaccccgaacgatacatgatgcttttcccctaaca 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aatagattccccgttctaccacagccaccccgaacgatacatgatgcttttcccctaaca 305
Query: 835 aggaagtggtggccctcgtggg 856
||||||||||||||||||||||
Sbjct: 306 aggaagtggtggccctcgtggg 327
>gnl|LJGI|TC61976 weakly similar to UniRef100_A7NVV8 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 723
Score = 557 bits (281), Expect = e-158
Identities = 281/281 (100%)
Strand = Plus / Plus
Query: 1 atgggatttcctagagaaatgattttcaaagtgattcaggaacatggtgaggaaaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgggatttcctagagaaatgattttcaaagtgattcaggaacatggtgaggaaaatgaa 502
Query: 61 gataagctactggaagaacttcttacatactcggctctagaaagctctcctcagccacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gataagctactggaagaacttcttacatactcggctctagaaagctctcctcagccacag 562
Query: 121 gagcagccacaactggaaccagatcccttctcttcagagtatggagggagctcttgggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gagcagccacaactggaaccagatcccttctcttcagagtatggagggagctcttgggat 622
Query: 181 atctcagatgctgatactttttctgatgatgaggaaattacaaaatctgtttctggaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atctcagatgctgatactttttctgatgatgaggaaattacaaaatctgtttctggaaat 682
Query: 241 aatgataccctggtgtccttggtaaaaatgggcttcaagga 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aatgataccctggtgtccttggtaaaaatgggcttcaagga 723
>gnl|LJGI|AV417590 similar to UniRef100_A7PM76 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 415
Score = 505 bits (255), Expect = e-142
Identities = 255/255 (100%)
Strand = Plus / Minus
Query: 1246 cttcatcgccttggtatccctctaaagaatgttgtttcagttgaaaaatcagaagtgaat 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cttcatcgccttggtatccctctaaagaatgttgtttcagttgaaaaatcagaagtgaat 287
Query: 1306 aggaacattgtcaggagttggtgggagcaaacaaatcagaaagggaatttgattgatctg 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aggaacattgtcaggagttggtgggagcaaacaaatcagaaagggaatttgattgatctg 227
Query: 1366 gatgatgtacagctgctggatgctgatcgtttggagcagctgatgagcgcgaccgggggc 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gatgatgtacagctgctggatgctgatcgtttggagcagctgatgagcgcgaccgggggc 167
Query: 1426 tttgatctggttattggtggcagtccatgtaataacctggctggtagtaacagggtcagc 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tttgatctggttattggtggcagtccatgtaataacctggctggtagtaacagggtcagc 107
Query: 1486 cgggatggactggag 1500
|||||||||||||||
Sbjct: 106 cgggatggactggag 92
>gnl|LJGI|TC61034 similar to UniRef100_Q76KU6 Cluster: DNA methyltransferase; n=1;
Nicotiana tabacum|Rep: DNA methyltransferase - Nicotiana
tabacum (Common tobacco), partial (3%)
Length = 851
Score = 377 bits (190), Expect = e-103
Identities = 320/363 (88%), Gaps = 9/363 (2%)
Strand = Plus / Plus
Query: 1 atgggatttcctagagaaatgattttcaaagtgattcaggaacatggtgaggaaaatgaa 60
||||||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||
Sbjct: 495 atgggatttcccagagaaatggtttccaaagtaattcaggaacatggtgaggaaaatgaa 554
Query: 61 gataagctactggaagaacttcttacatactcggctctagaaagctctcctcagccacag 120
||||| ||||| ||||||||||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 555 gataaactacttgaagaacttctcacgtactcggctctagaaagttctccccagccacaa 614
Query: 121 gagcagccacaactggaaccagatcccttctcttcagagtatggagggagctcttgggat 180
|||| | ||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 615 cagca------agtggaaccagatccctgctcttcagagtatggagggagttcttgggat 668
Query: 181 a---tctcagatgctgatactttttctgatgatgaggaaattacaaaatctgtttctgga 237
| |||||||||||| |||||||||||||||| ||| | | |||| ||||||||| |
Sbjct: 669 gatttgtcagatgctgatgctttttctgatgatgaagaagtcagaaaacctgtttctgaa 728
Query: 238 aataatgataccctggtgtccttggtaaaaatgggcttcaaggaagaggaagctttaatt 297
|||||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 729 aataatgataccttgacgtccttggtgaaaatgggcttcaaggaagaggaagctttgatt 788
Query: 298 gccatagaaagattaggtccaaactcctcgcttgaagaactggttgattttataggtgtt 357
||||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||||
Sbjct: 789 gccattgaaagattaggtccaaactcctcgcttgaagatttggtggattttattggtgtt 848
Query: 358 gct 360
|||
Sbjct: 849 gct 851