Miyakogusa Predicted Gene

Lj0g3v0004399.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0004399.1 tr|A9RZV6|A9RZV6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_179856,53.33,3e-17,ACETYLTRANSFERASE-RELATED,NULL,
gene.g348.t1.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS325281 similar to UniRef100_A7PY61 Cluster: Chromosom...   337   3e-92

>gnl|LJGI|FS325281 similar to UniRef100_A7PY61 Cluster: Chromosome chr15 scaffold_37,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_37, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 754

 Score =  337 bits (170), Expect = 3e-92
 Identities = 170/170 (100%)
 Strand = Plus / Plus

                                                                       
Query: 110 gctatcagtggataaaacggaagggaagacctgcaccgaggggaattgctccaataattg 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gctatcagtggataaaacggaagggaagacctgcaccgaggggaattgctccaataattg 644

                                                                       
Query: 170 tatcgaatcatgtttcgtatattgagcctatcttctatttctatgaactatttgccacca 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tatcgaatcatgtttcgtatattgagcctatcttctatttctatgaactatttgccacca 704

                                                             
Query: 230 ttgtggcatctgagtctcatgactccttaccttttgttggcaccattatt 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ttgtggcatctgagtctcatgactccttaccttttgttggcaccattatt 754



 Score =  218 bits (110), Expect = 2e-56
 Identities = 110/110 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctggcgcggttggtgctgttcggactgtgccttgcggtggggtttgtggcgaccaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atgctggcgcggttggtgctgttcggactgtgccttgcggtggggtttgtggcgaccaag 478

                                                             
Query: 61  ttggcgctctatggatggaaggataaggagaatcccatgcctgtgtggag 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttggcgctctatggatggaaggataaggagaatcccatgcctgtgtggag 528