Miyakogusa Predicted Gene

Lj0g3v0004379.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0004379.1 CUFF.282.1
         (503 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036647                                                      80   1e-14
gnl|LJGI|TC68370 similar to UniRef100_Q6MYW6 Cluster: Basic prol...    74   9e-13
gnl|LJGI|TC66377 similar to UniRef100_Q28256 Cluster: Platelet g...    60   1e-08
gnl|LJGI|TC80233 similar to UniRef100_Q4T7P8 Cluster: Chromosome...    56   2e-07

>gnl|LJGI|GO036647 
          Length = 510

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcactcctcttccgtctcagaagaatgctcaccttcacaaaccctgctccttctctt 60
           |||||| ||||| |||||||||||| ||| | |||  |||| |||||| ||| |||||||
Sbjct: 80  atggcattcctcctccgtctcagaacaatccacactgtcactaacccttctcgttctctt 139

                               
Query: 61  tctctgctccaccaccaccg 80
           ||||||||||||||||||||
Sbjct: 140 tctctgctccaccaccaccg 159



 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 290 ctccggcgccggcgacaaccccaactccaaccgtccctcccctaccctt 338
           |||||||||||||||| ||||||||||| |||  ||||||||| |||||
Sbjct: 356 ctccggcgccggcgaccaccccaactccgaccaaccctccccttccctt 404


>gnl|LJGI|TC68370 similar to UniRef100_Q6MYW6 Cluster: Basic proline-rich protein;
           n=1; Aspergillus fumigatus|Rep: Basic proline-rich
           protein - Aspergillus fumigatus (Sartorya fumigata),
           partial (7%)
          Length = 814

 Score = 73.8 bits (37), Expect = 9e-13
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 8   tcctcttccgtctcagaagaatgctcaccttcacaaaccctgctccttctctttctctgc 67
           ||||| |||||||||||| ||| | ||| || || |||||| ||| ||||||||||||||
Sbjct: 65  tcctcctccgtctcagaacaatccacactttgactaacccttctcgttctctttctctgc 124

                        
Query: 68  tccaccaccaccg 80
           |||||||||||||
Sbjct: 125 tccaccaccaccg 137


>gnl|LJGI|TC66377 similar to UniRef100_Q28256 Cluster: Platelet glycoprotein Ib alpha
           chain precursor; n=1; Canis lupus familiaris|Rep:
           Platelet glycoprotein Ib alpha chain precursor - Canis
           familiaris (Dog), partial (4%)
          Length = 1281

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 301 gcgacaaccccaactccaaccgtccctcccctacccttctcagcgaactcaggg 354
           ||||| |||||||||||||||  |||| |||| |||||||||| ||||||||||
Sbjct: 272 gcgacgaccccaactccaaccaccccttcccttcccttctcagagaactcaggg 325


>gnl|LJGI|TC80233 similar to UniRef100_Q4T7P8 Cluster: Chromosome undetermined
           SCAF8055, whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF8055,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer), partial (4%)
          Length = 1199

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   tcctcttccgtctcagaagaatgctcaccttcacaaaccctgctccttctctttctctgc 67
           ||||| |||||||||||||||| | ||| |||||||||||    ||||||||||||||||
Sbjct: 100 tcctcctccgtctcagaagaatccccactttcacaaacccaaacccttctctttctctgc 159