Miyakogusa Predicted Gene

Lj0g3v0004109.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0004109.1 Non Chatacterized Hit- tr|G7IG28|G7IG28_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,80.56,0.000000006, ,CUFF.252.1
         (264 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO023212                                                     507   e-143
gnl|LJGI|TC71924                                                       72   2e-12

>gnl|LJGI|GO023212 
          Length = 540

 Score =  507 bits (256), Expect = e-143
 Identities = 262/264 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaacatttttctagacaacaaccgtagtctttggtgggaatatcatgatatgaatctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atgaacatttttctagacaacaaccgtagtctttggtgggaatatcatgatatgaatctg 281

                                                                       
Query: 61  gtagtactcacagaactccaggcaactctactaagatgggaaaaagattgccacaacagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gtagtactcacagaactccaggcaactctactaagatgggaaaaagattgccacaacagt 221

                                                                       
Query: 121 aagtatatggatttattctcaattatccgcaacactgctggagcactcaaaagagacttt 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 220 aagtatatggatttattctcaattgtccgcaacactgctggagcactcaaaagagacttt 161

                                                                       
Query: 181 gagaaggtgcacttcacatgtttaccagagataggagagatcctagttaatggattaacg 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 160 gagaaggtgcacttcacatgtttaccagagataggagagatcctagttaacggattaacg 101

                                   
Query: 241 gtgaagcgaaaatcacacttctag 264
           ||||||||||||||||||||||||
Sbjct: 100 gtgaagcgaaaatcacacttctag 77


>gnl|LJGI|TC71924 
          Length = 1279

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 30  tctttggtgggaatatcatgatatgaatctggtagtactcacagaactccaggcaactct 89
           |||||| |||||| |||| ||||||||||||| || || |||||||||||||||||||||
Sbjct: 580 tctttgttgggaacatcaagatatgaatctggcagcacccacagaactccaggcaactct 521