Miyakogusa Predicted Gene

Lj0g3v0002839.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0002839.1 Non Chatacterized Hit- tr|H0VDI7|H0VDI7_CAVPO
Uncharacterized protein OS=Cavia porcellus
GN=LOC10072,41.18,0.0000003,CALCIUM-BINDING PROTEIN,NULL; EF-HAND
CALCIUM-BINDING DOMAIN CONTAINING PROTEIN,NULL;
EF_HAND_1,EF-H,CUFF.174.1
         (486 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66055 similar to UniRef100_A7PGK7 Cluster: Chromosome...   940   0.0  

>gnl|LJGI|TC66055 similar to UniRef100_A7PGK7 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (93%)
          Length = 618

 Score =  940 bits (474), Expect = 0.0
 Identities = 483/486 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaatgctccaaaccgatgatcagatcaagcaactcaacgacatattcaaccgcttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atgtcaatgctccaaaccgatgatcagatcaagcaactcaacgacatattcaaccgcttc 159

                                                                       
Query: 61  gacatggactccgacggcagcctcacccacctggagctcgccgcgctcctccgtgccctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 160 gacatggactccgacggcagcctcacccacctggagctcgccgcgctcctccgtgccctt 219

                                                                       
Query: 121 ggcatcaagcccactggggacgagctccacggcctcctttccaacatggataacaacggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggcatcaagcccactggggacgagctccacggcctcctttccaacatggataacaacggc 279

                                                                       
Query: 181 aacggctacatcgagtttgacgagctcgtcgccgccatcatgcccgacatgaacgaggat 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 280 aacggctacatcgagtttgacgagcttgtcgccgccatcatgcccgacatgaacgaggat 339

                                                                       
Query: 241 gtcctcatcaaccaggagcagctcctagaggtttttcgatccttcgaccgcgacggtaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtcctcatcaaccaggagcagctcctagaggtttttcgatccttcgaccgcgacggtaat 399

                                                                       
Query: 301 ggatacattaccgccgcggagcttgcaggatcgatggccaagatgggacaccccctcacg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggatacattaccgccgcggagcttgcaggatcgatggccaagatgggacaccccctcacg 459

                                                                       
Query: 361 tacaaggagctcgctagcatgatggcacaggctgatagcaatggcgatggggttataagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tacaaggagctcgctagcatgatggcacaggctgatagcaatggcgatggggttataagc 519

                                                                       
Query: 421 tttaatgagtttgccaccatcatggccaaatctgctgttgatttcttcggcgttaaggtg 480
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 520 tttaatgagtttgccaccatcatggccaaatctgctgttgattttttcggcgttaaggtg 579

                 
Query: 481 cgatag 486
           ||||||
Sbjct: 580 cgatag 585