Miyakogusa Predicted Gene
- Lj0g3v0002119.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0002119.3 Non Chatacterized Hit- tr|I1LKQ8|I1LKQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35313
PE,83.64,7e-19,GTPase activation domain, GAP,Rho GTPase activation
protein; no description,Rho GTPase-activating pr,CUFF.124.3
(468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69514 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n... 888 0.0
gnl|LJGI|TC77624 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n... 850 0.0
gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome... 80 1e-14
>gnl|LJGI|TC69514 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n=1; Nicotiana
tabacum|Rep: RhoGAP1 - Nicotiana tabacum (Common
tobacco), partial (16%)
Length = 547
Score = 888 bits (448), Expect = 0.0
Identities = 463/468 (98%)
Strand = Plus / Plus
Query: 1 atgaatcttatttattgcagaaacatggcttgcaattatttgagccaaaatgcccctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atgaatcttatttattgcagaaacatggcttgcaattatttgagccaaaatgcccctcat 102
Query: 61 tatttaccaaccatgaagaaactgagacatcttgcaactatgtttggagtttcaacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tatttaccaaccatgaagaaactgagacatcttgcaactatgtttggagtttcaacagaa 162
Query: 121 tcaatgcagttatcatatgacacaagagggaacagtgtgccgaaaattttgttacaaatg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 163 tcaatgcagttatcatatgacacaagagggaacagtgtgccgacaattttgttacaaatg 222
Query: 181 caaaggcacttgtatgcccaaggagggttgcaggcagaggggattttcataattaataca 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 223 caaaggcacttgtatgcccaaggagggttgcaggcagaggggattttcagaattaataca 282
Query: 241 gacaatactcacactgaagcttcccttcttgactgggctattaatctgatggttgatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gacaatactcacactgaagcttcccttcttgactgggctattaatctgatggttgatgtt 342
Query: 301 gtccaagaggaacatctgagtaagatgaatgcacacaatattgccatggttccagtaaac 360
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 343 gtccaagaggaacatctgagtaggatgaatgcacacaatattgccatggttctagtaaac 402
Query: 361 tcagtttctccaggaatagtagggaggaaaatgcatacatatactgtattagtcgttttc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 403 tcagtttctccaggaatagtagggaggaaaatgcatacatatactgtattagtccttttc 462
Query: 421 atttttgttataagattgcagatcatagttaaaatattgctaatgtaa 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atttttgttataagattgcagatcatagttaaaatattgctaatgtaa 510
>gnl|LJGI|TC77624 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n=1; Nicotiana
tabacum|Rep: RhoGAP1 - Nicotiana tabacum (Common
tobacco), partial (16%)
Length = 926
Score = 850 bits (429), Expect = 0.0
Identities = 444/449 (98%)
Strand = Plus / Plus
Query: 20 gaaacatggcttgcaattatttgagccaaaatgcccctcattatttaccaaccatgaaga 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gaaacatggcttgcaattatttgagccaaaatgcccctcattatttaccaaccatgaaga 351
Query: 80 aactgagacatcttgcaactatgtttggagtttcaacagaatcaatgcagttatcatatg 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aactgagacatcttgcaactatgtttggagtttcaacagaatcaatgcagttatcatatg 411
Query: 140 acacaagagggaacagtgtgccgaaaattttgttacaaatgcaaaggcacttgtatgccc 199
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 412 acacaagagggaacagtgtgccgacaattttgttacaaatgcaaaggcacttgtatgccc 471
Query: 200 aaggagggttgcaggcagaggggattttcataattaatacagacaatactcacactgaag 259
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 472 aaggagggttgcaggcagaggggattttcagaattaatacagacaatactcacactgaag 531
Query: 260 cttcccttcttgactgggctattaatctgatggttgatgttgtccaagaggaacatctga 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttcccttcttgactgggctattaatctgatggttgatgttgtccaagaggaacatctga 591
Query: 320 gtaagatgaatgcacacaatattgccatggttccagtaaactcagtttctccaggaatag 379
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 592 gtaggatgaatgcacacaatattgccatggttctagtaaactcagtttctccaggaatag 651
Query: 380 tagggaggaaaatgcatacatatactgtattagtcgttttcatttttgttataagattgc 439
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 652 tagggaggaaaatgcatacatatactgtattagtccttttcatttttgttataagattgc 711
Query: 440 agatcatagttaaaatattgctaatgtaa 468
|||||||||||||||||||||||||||||
Sbjct: 712 agatcatagttaaaatattgctaatgtaa 740
>gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1002
Score = 79.8 bits (40), Expect = 1e-14
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 248 ctcacactgaagcttcccttcttgactgggctattaatctgatggttgatgttgtccaag 307
|||||||||||||| | || | |||||||| || |||||||||| |||||||||||||
Sbjct: 145 ctcacactgaagctgcactcttggactgggccatcaatctgatggctgatgttgtccaac 204
Query: 308 aggaacatctgagtaagatgaatgcacacaatattgccatggtt 351
|||||||| | | |||||||||||| | || ||||||||||||
Sbjct: 205 aggaacatgttaataagatgaatgcgcgtaacattgccatggtt 248